 | ||||||||||||||
| ||||||||||||||
 | ||||||||||||||
RNA Secondary Structure Atlas - PDB - 4QJH_F
RNA: 4QJH_F
Rfam family:
-
| GCAAUAAAGCGGUUACAAGCCCGCAAAAAUAGCAGAGUAAUGUCGCG | |||
| Reference structure (std) | [ sec struct ] | .........(((.[[[....))).............]]]........ | |
| Reference structure (ext) | [ sec struct ] |
........((((([[[[)[.)))).(.)]......]]]]........ ( ) |
|
| CentroidFold (ext) | [ FASTA input ] | [ sec struct ] | ........((((........))))....................... |
| CentroidFold | [ FASTA input ] | [ sec struct ] | ........((((........))))....................... |
| ContextFold | [ FASTA input ] | [ sec struct ] | ((......((((........)))).......)).((......))... |
| Contrafold | [ FASTA input ] | [ sec struct ] | ((......((((........)))).......)).............. |
| DotKnot | [ FASTA input ] | [ sec struct ] | ........((((........)))).......(((......))).... |
| Fold | [ FASTA input ] | [ sec struct ] | ........((((........)))).......((.((......)))). |
| HotKnots | [ FASTA input ] | [ sec struct ] | ((......((((........)))).......(((......))).)). |
| IPknot | [ FASTA input ] | [ sec struct ] | ........((((........))))....................... |
| MaxExpect | [ FASTA input ] | [ sec struct ] | ........((((........)))).......((.((......)))). |
| McQFold | [ FASTA input ] | [ sec struct ] | ........((((........))))....................... |
| NanoFolder | [ FASTA input ] | [ sec struct ] | (((.((..(((([[[[..{{)))).....)).....]]]]))).}}. |
| Pknots | [ FASTA input ] | [ sec struct ] | ........((((........)))).......((.((......)))). |
| PknotsRG | [ FASTA input ] | [ sec struct ] | ((......((((........)))).......(((......))).)). |
| ProbKnot | [ FASTA input ] | [ sec struct ] | ........((((((...)).)))).......((.((......)))). |
| RDfolder | [ FASTA input ] | [ sec struct ] | ........((((........))))....................... |
| RNASLOpt | [ FASTA input ] | [ sec struct ] | ........((((........))))....................... |
| RNAfold | [ FASTA input ] | [ sec struct ] | ((......((((........)))).......(((......))).)). |
| RNAshapes | [ FASTA input ] | [ sec struct ] | ((......((((........)))).......(((......))).)). |
| RNAsubopt | [ FASTA input ] | [ sec struct ] | ((......((((........)))).......(((......))).)). |
| RNAwolf (ext) | [ FASTA input ] | [ sec struct ] | (((.((.(((.((((((..........))))))))).)).))).... |
| RNAwolf | [ FASTA input ] | [ sec struct ] | (((.((.....(((((............)))))....)).))).... |
| Sfold | [ FASTA input ] | [ sec struct ] | ((......((((........)))).......(((......))).)). |
| UNAFold | [ FASTA input ] | [ sec struct ] | ((......((((........)))).......(((......))).)). |
| Vsfold4 | [ FASTA input ] | [ sec struct ] | ........((((........))))....................... |
| Vsfold5 | [ FASTA input ] | [ sec struct ] | ........((((........))))....................... |