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RNA Secondary Structure Atlas - PDB - 4UN5_A
RNA: 4UN5_A
Rfam family:
-
| AUAACUCAAUUUGUAAAAAAGUUUUAGAGCUAGAAAUAGCAAGUUAAAAUAAGGCUAGUCCGUUAUCAACUUGAAAAAGUG | |||
| Reference structure (std) | [ sec struct ] | ....................((((((..((((....))))....))))))..(((..).)).......((((....)))). | |
| Reference structure (ext) | [ sec struct ] | ....................((((((..((((....))))....)))))).((((..).)))......((((....)))). | |
| CentroidFold (ext) | [ FASTA input ] | [ sec struct ] | ............................((((....))))((((........................))))......... |
| CentroidFold | [ FASTA input ] | [ sec struct ] | ............................((((....))))......................................... |
| ContextFold | [ FASTA input ] | [ sec struct ] | .(.((.......)).)....((((((..((((....))))....))))))..................((((....)))). |
| Contrafold | [ FASTA input ] | [ sec struct ] | ............................((((....))))..(((.......(((()).))......)))((....))... |
| DotKnot | [ FASTA input ] | [ sec struct ] | .......(((((.......[[[[[[[..((((....)))))))))....]]]]]]]............((((....)))). |
| Fold | [ FASTA input ] | [ sec struct ] | ....((((((((......)))))...)))(((....)))((((((...((((((.....)).)))).))))))........ |
| HotKnots | [ FASTA input ] | [ sec struct ] | (((((...(((.((......(((((((.((((....))))...)))))))...)).)))..)))))..((((....)))). |
| IPknot | [ FASTA input ] | [ sec struct ] | ......................((((..((((....))))..[[)))).....]].............((((....)))). |
| MaxExpect | [ FASTA input ] | [ sec struct ] | .......(((((......))))).....((((....))))............((.....)).......((((....)))). |
| McQFold | [ FASTA input ] | [ sec struct ] | .....................((((((..))))))....((((((......................))))))........ |
| NanoFolder | [ FASTA input ] | [ sec struct ] | ((((([[(((((((....[[[[[[[[..{{{{{..<<.)))))))....]]]<<}}}}}>>))))).]]]]]]]....>>. |
| Pknots | [ FASTA input ] | [ sec struct ] | .((((((.....)((((.....))))..((((....)))).)))))......((.....)).......((((....)))). |
| PknotsRG | [ FASTA input ] | [ sec struct ] | (((((...(((.((......(((((((.((((....))))...)))))))...)).)))..)))))..((((....)))). |
| ProbKnot | [ FASTA input ] | [ sec struct ] | .......(((((......)))))((((.((((....))))...))))...................(.((((....))))) |
| RDfolder | [ FASTA input ] | [ sec struct ] | .......................................((((((...((((..........)))).))))))........ |
| RNASLOpt | [ FASTA input ] | [ sec struct ] | ................................................................................. |
| RNAfold | [ FASTA input ] | [ sec struct ] | (((((...(((.((......(((((((.((((....))))...)))))))...)).)))..)))))..((((....)))). |
| RNAshapes | [ FASTA input ] | [ sec struct ] | (((((...(((.((......(((((((.((((....))))...)))))))...)).)))..)))))..((((....)))). |
| RNAsubopt | [ FASTA input ] | [ sec struct ] | (((((...............(((((((.((((....))))...)))))))..((.....)))))))..((((....)))). |
| RNAwolf | [ FASTA input ] | [ sec struct ] | .....((((.(((((((((...)))...(((((...((((..))))........)))))...))).))).))))....... |
| RNAwolf (ext) | [ FASTA input ] | [ sec struct ] | (..((((((((((((((((...)))(((((((((..((((..)))).....)..))))))))))).)))))))).))..). |
| Sfold | [ FASTA input ] | [ sec struct ] | ............................((((....))))............................((((....)))). |
| UNAFold | [ FASTA input ] | [ sec struct ] | (((((...(((.((......(((((((.((((....))))...)))))))...)).)))..)))))..((((....)))). |
| Vsfold4 | [ FASTA input ] | [ sec struct ] | ..(((..(((((......))))).....((((....)))).((((.......)))).....)))....((((....)))). |
| Vsfold5 | [ FASTA input ] | [ sec struct ] | .((((..(((((......))))).....((((....)))).((((.......)))).....))))...((((....)))). |