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RNA Secondary Structure Atlas - RNASTRAND - PDB_00001



RNA: PDB_00001
Rfam family: -

CGCGAAUUAGCGCGCGAAUUAGCG
Reference structure (ext) [ sec struct ] (((((((((((())))))))))))
Afold [ FASTA input ] [ sec struct ] (((.((((.(....).)))).)))
Alterna [ FASTA input ] [ sec struct ] ((((......))))..........
CRWrnafold [ FASTA input ] [ sec struct ] ((((........))))........
CentroidFold [ FASTA input ] [ sec struct ] (((.((((.(....).)))).)))
CentroidHomfold‑LAST [ FASTA input ] [ sec struct ] (((.((((.(....).)))).)))
ContextFold [ FASTA input ] [ sec struct ] ((((........))))........
Contrafold [ FASTA input ] [ sec struct ] (((.((((.((())).)))).)))
Cylofold [ FASTA input ] [ sec struct ] (((......)))(((......)))
DotKnot [ FASTA input ] [ sec struct ] (((.[[[[.)))....]]]]....
Fold [ FASTA input ] [ sec struct ] (((......)))(((......)))
HotKnots [ FASTA input ] [ sec struct ] (((......)))(((......)))
IPknot [ FASTA input ] [ sec struct ] .((........))...........
MCFold (ext) [ FASTA input ] [ sec struct ] (((((((((((..)))))))))))
MaxExpect [ FASTA input ] [ sec struct ] (((......)))(((......)))
McQFold [ FASTA input ] [ sec struct ] ((((......))))..........
Pknots [ FASTA input ] [ sec struct ] (((......)))(((......)))
PknotsRG [ FASTA input ] [ sec struct ] ((((.....[[.)))).....]].
ProbKnot [ FASTA input ] [ sec struct ] (((.[[[[.)))(((.]]]].)))
RDfolder [ FASTA input ] [ sec struct ] ((((........))))........
RNASLOpt [ FASTA input ] [ sec struct ] ((((........))))........
RNAfold [ FASTA input ] [ sec struct ] (((......)))(((......)))
RNAshapes [ FASTA input ] [ sec struct ] (((......)))(((......)))
RNAsubopt [ FASTA input ] [ sec struct ] .(((......)))((......)).
RNAwolf (ext) [ FASTA input ] [ sec struct ] (...)..((((.(...)))))...
Sfold [ FASTA input ] [ sec struct ] .((......))..((......)).
UNAFold [ FASTA input ] [ sec struct ] (((......)))(((......)))
Vsfold4 [ FASTA input ] [ sec struct ] ((((........))))........
Vsfold5 [ FASTA input ] [ sec struct ] ((((........))))........