 | ||||||||||||||
| ||||||||||||||
 | ||||||||||||||
RNA Secondary Structure Atlas - RNASTRAND - PDB_00005
RNA: PDB_00005
Rfam family:
Tymo_tRNA-like
| GGGAGCUCAACUCUCCCCCCCUUUUCCGAGGGUCAUCGGAACCA | |||
| Reference structure (ext) | [ sec struct ] | (((((.......)))))(((...[[[[[[)))...]]]]]]... | |
| Alterna | [ FASTA input ] | [ sec struct ] | (((((.......)))))......((((((......))))))... |
| CMfinder(seed) | [ FASTA input ] | [ sec struct ] | .((.(.........))).......(((((......))))).... |
| CRWrnafold | [ FASTA input ] | [ sec struct ] | (((((.......)))))......((((((......))))))... |
| Carnac(seed) | [ FASTA input ] | [ sec struct ] | (((((.......)))))......((((((......))))))... |
| CentroidAlifold(seed) | [ FASTA input ] | [ sec struct ] | .((((.......))))........(((((......))))).... |
| CentroidFold | [ FASTA input ] | [ sec struct ] | (((((.......)))))......((((((......))))))... |
| CentroidHomfold‑LAST | [ FASTA input ] | [ sec struct ] | ....(.......)..........((((((......))))))... |
| ContextFold | [ FASTA input ] | [ sec struct ] | (((((.....))))).........(((((......))))).... |
| Contrafold | [ FASTA input ] | [ sec struct ] | (((((.......)))))......((((((......))))))... |
| Cylofold | [ FASTA input ] | [ sec struct ] | (((((.......))))).(((..[[[[[[)))...]]]]]]... |
| DAFS(seed) | [ FASTA input ] | [ sec struct ] | ....(.......).....(((........)))............ |
| DotKnot | [ FASTA input ] | [ sec struct ] | (((((.......))))).(((..[[[[[[)))...]]]]]]... |
| Fold | [ FASTA input ] | [ sec struct ] | (((((.......)))))......((((((......))))))... |
| HotKnots | [ FASTA input ] | [ sec struct ] | (((((.......)))))......((((((......))))))... |
| IPknot | [ FASTA input ] | [ sec struct ] | (((((.......))))).((((.[[[[[))))....]]]]]... |
| MCFold (ext) | [ FASTA input ] | [ sec struct ] | (((((((...)))))))....((((((((((..))))))))).) |
| MXScarna(seed) | [ FASTA input ] | [ sec struct ] | ........................(((((......))))).... |
| Mastr(seed) | [ FASTA input ] | [ sec struct ] | (....)(..).............((((((......))))))... |
| MaxExpect | [ FASTA input ] | [ sec struct ] | (((((.......)))))......((((((......))))))... |
| McQFold | [ FASTA input ] | [ sec struct ] | (((((.......)))))......((((((......))))))... |
| Murlet(seed) | [ FASTA input ] | [ sec struct ] | .....((.)).............((((..........))))... |
| PETfold_2.0(seed) | [ FASTA input ] | [ sec struct ] | ..(((.......)))........((((((......))))))... |
| PETfold_pre2.0(seed) | [ FASTA input ] | [ sec struct ] | ..(((.......)))........((((((......))))))... |
| Pknots | [ FASTA input ] | [ sec struct ] | (((((.......)))))(((...[[[[[[)))...]]]]]]... |
| PknotsRG | [ FASTA input ] | [ sec struct ] | (((((.......)))))(((...[[[[[[)))...]]]]]]... |
| ProbKnot | [ FASTA input ] | [ sec struct ] | (((((.......))))).(((..[[[[[[)))...]]]]]]... |
| RDfolder | [ FASTA input ] | [ sec struct ] | (((((.......)))))......((((((......))))))... |
| RNASLOpt | [ FASTA input ] | [ sec struct ] | (((((.......)))))......((((((......))))))... |
| RNASampler(seed) | [ FASTA input ] | [ sec struct ] | (((((.......)))))......((((((......))))))... |
| RNAalifold(seed) | [ FASTA input ] | [ sec struct ] | ........................(((((......))))).... |
| RNAfold | [ FASTA input ] | [ sec struct ] | (((((.......)))))......((((((......))))))... |
| RNAshapes | [ FASTA input ] | [ sec struct ] | (((((.......)))))......((((((......))))))... |
| RNAsubopt | [ FASTA input ] | [ sec struct ] | (((((.......)))))......((((((......))))))... |
| RNAwolf (ext) | [ FASTA input ] | [ sec struct ] | ((((((...)..))))).((((......))))....(..).... |
| RSpredict(seed) | [ FASTA input ] | [ sec struct ] | ..(((.......))..)......((((((......))))))... |
| Sfold | [ FASTA input ] | [ sec struct ] | (((((.......)))))......((((((......))))))... |
| UNAFold | [ FASTA input ] | [ sec struct ] | (((((.......)))))......((((((......))))))... |
| Vsfold4 | [ FASTA input ] | [ sec struct ] | .((((.......)))).......((((((......))))))... |
| Vsfold5 | [ FASTA input ] | [ sec struct ] | (((((....[[[)))))......((((((.]]]..))))))... |