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RNA Secondary Structure Atlas - RNASTRAND - PDB_00034
RNA: PDB_00034
Rfam family:
-
| AACGGGCGCAGAAUCUGACGGUACGUUU | |||
| Reference structure (ext) | [ sec struct ] | ((((((((((((.)))).))).))))). | |
| Afold | [ FASTA input ] | [ sec struct ] | ((((..(((((...))).))...)).)) |
| Alterna | [ FASTA input ] | [ sec struct ] | ((((.((.(((...)))...)).)))). |
| CRWrnafold | [ FASTA input ] | [ sec struct ] | ((((..(((((...))).))...)))). |
| CentroidFold | [ FASTA input ] | [ sec struct ] | .(((...................))).. |
| CentroidHomfold‑LAST | [ FASTA input ] | [ sec struct ] | ............................ |
| ContextFold | [ FASTA input ] | [ sec struct ] | .(((..(((((...))).))...))).. |
| Contrafold | [ FASTA input ] | [ sec struct ] | ((((...................)))). |
| Cylofold | [ FASTA input ] | [ sec struct ] | ((((...................)))). |
| DotKnot | [ FASTA input ] | [ sec struct ] | ((((....(((...)))......)))). |
| Fold | [ FASTA input ] | [ sec struct ] | ((((..(((((...))).))...)))). |
| HotKnots | [ FASTA input ] | [ sec struct ] | ((((..(((((...))).))...)))). |
| IPknot | [ FASTA input ] | [ sec struct ] | ((((..(((((...))).))...)))). |
| MCFold (ext) | [ FASTA input ] | [ sec struct ] | (((((((((((...))).).))))))). |
| MaxExpect | [ FASTA input ] | [ sec struct ] | ((((..(((((...))).))...)))). |
| McQFold | [ FASTA input ] | [ sec struct ] | ((((....(((...)))......)))). |
| Pknots | [ FASTA input ] | [ sec struct ] | ..((((.......))))((.....)).. |
| PknotsRG | [ FASTA input ] | [ sec struct ] | ((((..(((((...))).))...)))). |
| ProbKnot | [ FASTA input ] | [ sec struct ] | ((((.((((((...))).)).).)))). |
| RDfolder | [ FASTA input ] | [ sec struct ] | ..(((.........)))........... |
| RNASLOpt | [ FASTA input ] | [ sec struct ] | ..((((.......))))........... |
| RNAfold | [ FASTA input ] | [ sec struct ] | ((((..(((((...))).))...)))). |
| RNAshapes | [ FASTA input ] | [ sec struct ] | ((((..(((((...))).))...)))). |
| RNAsubopt | [ FASTA input ] | [ sec struct ] | ((((..(((((...))).))...)))). |
| RNAwolf (ext) | [ FASTA input ] | [ sec struct ] | ((((.((((((...))).)))..)))). |
| Sfold | [ FASTA input ] | [ sec struct ] | ((((..(((((...))).))...)))). |
| UNAFold | [ FASTA input ] | [ sec struct ] | ((((..(((((...))).))...)))). |
| Vsfold4 | [ FASTA input ] | [ sec struct ] | ((((...................)))). |
| Vsfold5 | [ FASTA input ] | [ sec struct ] | ...(((.......)))(((.....))). |