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RNA Secondary Structure Atlas - RNASTRAND - PDB_00096
RNA: PDB_00096
Rfam family:
-
| UACUAACGUAGUAUACUAACGUAGUA | |||
| Reference structure (ext) | [ sec struct ] | ((((.(((((((()))).)))))))) | |
| Afold | [ FASTA input ] | [ sec struct ] | (((((.(((((....)).)))))))) |
| Alterna | [ FASTA input ] | [ sec struct ] | ((((.((((.........)))))))) |
| CRWrnafold | [ FASTA input ] | [ sec struct ] | ((((.((((.........)))))))) |
| CentroidFold | [ FASTA input ] | [ sec struct ] | ((((.((((((....)).)))))))) |
| CentroidHomfold‑LAST | [ FASTA input ] | [ sec struct ] | ((((.((((((....)).)))))))) |
| ContextFold | [ FASTA input ] | [ sec struct ] | .((((.(((.........))))))). |
| Contrafold | [ FASTA input ] | [ sec struct ] | ((((.(((((((()))).)))))))) |
| Cylofold | [ FASTA input ] | [ sec struct ] | (((....)))...(((....)))... |
| DotKnot | [ FASTA input ] | [ sec struct ] | (((((...(((....)))...))))) |
| Fold | [ FASTA input ] | [ sec struct ] | (((((.(((((....)).)))))))) |
| HotKnots | [ FASTA input ] | [ sec struct ] | (((((.(((((....)).)))))))) |
| IPknot | [ FASTA input ] | [ sec struct ] | (((((.(((.........)))))))) |
| MCFold (ext) | [ FASTA input ] | [ sec struct ] | ((((.(((((((..))).)))))))) |
| MaxExpect | [ FASTA input ] | [ sec struct ] | .((((.(((((....)).))))))). |
| McQFold | [ FASTA input ] | [ sec struct ] | (((((...)))))(((((...))))) |
| Pknots | [ FASTA input ] | [ sec struct ] | (((....)))...(((....)))... |
| PknotsRG | [ FASTA input ] | [ sec struct ] | ((((.((((((....))).))))))) |
| ProbKnot | [ FASTA input ] | [ sec struct ] | (((((.(((((....)).)))))))) |
| RDfolder | [ FASTA input ] | [ sec struct ] | .....((((.........)))).... |
| RNASLOpt | [ FASTA input ] | [ sec struct ] | .....((((.........)))).... |
| RNAfold | [ FASTA input ] | [ sec struct ] | (((((.(((((....)).)))))))) |
| RNAshapes | [ FASTA input ] | [ sec struct ] | (((((.(((((....)).)))))))) |
| RNAsubopt | [ FASTA input ] | [ sec struct ] | ((((.((((((....))).))))))) |
| RNAwolf (ext) | [ FASTA input ] | [ sec struct ] | (((((..(((...))).....))))) |
| Sfold | [ FASTA input ] | [ sec struct ] | (((((.(((((....))).))))))) |
| UNAFold | [ FASTA input ] | [ sec struct ] | (((((.(((((....)).)))))))) |
| Vsfold4 | [ FASTA input ] | [ sec struct ] | .((((.(((((....)).))))))). |
| Vsfold5 | [ FASTA input ] | [ sec struct ] | ((((.[[[[)))).....]]]].... |