CompaRNA - on-line benchmarks of RNA structure prediction methods
Home

Methods
Datasets
Rankings
RNA 2D Atlas

Help
FAQ

Contact us
RSS feeds
Twitter

RNA Secondary Structure Atlas - RNASTRAND - PDB_00116



RNA: PDB_00116
Rfam family: -

CAGACUUCGGUCGCAGAGAUGG
Reference structure (ext) [ sec struct ] ..(((....))).(((..))).
Afold [ FASTA input ] [ sec struct ] (((((....))).......).)
Alterna [ FASTA input ] [ sec struct ] (((((....))).......)).
CRWrnafold [ FASTA input ] [ sec struct ] ..(((....))).((....)).
CentroidFold [ FASTA input ] [ sec struct ] ..(((....)))..........
CentroidHomfold‑LAST [ FASTA input ] [ sec struct ] ......................
ContextFold [ FASTA input ] [ sec struct ] ..(((....))).((....)).
Contrafold [ FASTA input ] [ sec struct ] ..(((....)))..........
Cylofold [ FASTA input ] [ sec struct ] ..(((....)))..........
DotKnot [ FASTA input ] [ sec struct ] ..(((....)))..........
Fold [ FASTA input ] [ sec struct ] ..(((....)))..........
HotKnots [ FASTA input ] [ sec struct ] ..(((....)))..........
IPknot [ FASTA input ] [ sec struct ] ..(((....)))..........
MCFold (ext) [ FASTA input ] [ sec struct ] .(((((..)))))(((..))).
MaxExpect [ FASTA input ] [ sec struct ] ..(((....)))..........
McQFold [ FASTA input ] [ sec struct ] ..((((..))))..........
Pknots [ FASTA input ] [ sec struct ] ..(((....))).((....)).
PknotsRG [ FASTA input ] [ sec struct ] ..(((....)))..........
ProbKnot [ FASTA input ] [ sec struct ] ..(((....)))..........
RDfolder [ FASTA input ] [ sec struct ] ..(((....)))..........
RNASLOpt [ FASTA input ] [ sec struct ] ......................
RNAfold [ FASTA input ] [ sec struct ] ..(((....)))..........
RNAshapes [ FASTA input ] [ sec struct ] ..(((....)))..........
RNAsubopt [ FASTA input ] [ sec struct ] ..(((....)))..........
RNAwolf (ext) [ FASTA input ] [ sec struct ] ..((((..)))).(((..))).
Sfold [ FASTA input ] [ sec struct ] ..(((....)))..........
UNAFold [ FASTA input ] [ sec struct ] ..(((....)))..........
Vsfold4 [ FASTA input ] [ sec struct ] ......................
Vsfold5 [ FASTA input ] [ sec struct ] ..(((....))).((....)).