CompaRNA - on-line benchmarks of RNA structure prediction methods
Home

Methods
Datasets
Rankings
RNA 2D Atlas

Help
FAQ

Contact us
RSS feeds
Twitter

RNA Secondary Structure Atlas - RNASTRAND - PDB_00209



RNA: PDB_00209
Rfam family: -

GGCGCAGUGGGCUAGCGCCACUCAAAAGGCCCAU
Reference structure (ext) [ sec struct ] (((((..[[[[[[.)))))........]]]]]].
Afold [ FASTA input ] [ sec struct ] ((.((((((((....).)))))......)).).)
Alterna [ FASTA input ] [ sec struct ] ......(((((((..............)))))))
CRWrnafold [ FASTA input ] [ sec struct ] ......(((((((..............)))))))
CentroidFold [ FASTA input ] [ sec struct ] (((((.........)))))...............
CentroidHomfold‑LAST [ FASTA input ] [ sec struct ] (((((.........)))))...............
ContextFold [ FASTA input ] [ sec struct ] (((((.........)))))...............
Contrafold [ FASTA input ] [ sec struct ] (((((((....)).)))))...............
Cylofold [ FASTA input ] [ sec struct ] (((((.[[[[[[[.)))))........]]]]]]]
DotKnot [ FASTA input ] [ sec struct ] (((((.[[[[[[[.)))))........]]]]]]]
Fold [ FASTA input ] [ sec struct ] (((((((....)).)))))...............
HotKnots [ FASTA input ] [ sec struct ] (((((.[[[[[[[.)))))........]]]]]]]
IPknot [ FASTA input ] [ sec struct ] (((((.[[[[[[[.)))))........]]]]]]]
MCFold (ext) [ FASTA input ] [ sec struct ] ((((.(((((((..)).)))))).....)))...
MaxExpect [ FASTA input ] [ sec struct ] (((((((....)).)))))...............
McQFold [ FASTA input ] [ sec struct ] (((((.[[[[[[[.)))))........]]]]]]]
Pknots [ FASTA input ] [ sec struct ] (((((.[[[[[[[.)))))........]]]]]]]
PknotsRG [ FASTA input ] [ sec struct ] (((((.[[[[[[[.)))))........]]]]]]]
ProbKnot [ FASTA input ] [ sec struct ] (((((((....)).)))))...............
RDfolder [ FASTA input ] [ sec struct ] (((((.........)))))...............
RNASLOpt [ FASTA input ] [ sec struct ] (((((.........)))))...............
RNAfold [ FASTA input ] [ sec struct ] (((((((....)).)))))...............
RNAshapes [ FASTA input ] [ sec struct ] (((((((....)).)))))...............
RNAsubopt [ FASTA input ] [ sec struct ] (((((((....)).)))))...............
RNAwolf (ext) [ FASTA input ] [ sec struct ] .......((((((..............)))))).
Sfold [ FASTA input ] [ sec struct ] (((((((....)).)))))...............
UNAFold [ FASTA input ] [ sec struct ] (((((((....)).)))))...............
Vsfold4 [ FASTA input ] [ sec struct ] (((((((....)).)))))...............
Vsfold5 [ FASTA input ] [ sec struct ] (((((.[[[[[[[.)))))........]]]]]]]