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RNA Secondary Structure Atlas - RNASTRAND - PDB_00341
RNA: PDB_00341
Rfam family:
-
| CCCAUGCGAGAGUAGGGACUGCCGAUGGUAGUGUGGGG | |||
| Reference structure (ext) | [ sec struct ] | ((((((((((((((((.....)))))))))))))))). | |
| Afold | [ FASTA input ] | [ sec struct ] | (((.(((....)))...((((((...))))))...))) |
| Alterna | [ FASTA input ] | [ sec struct ] | (((((((............((((...))))))))))). |
| CRWrnafold | [ FASTA input ] | [ sec struct ] | (((((((....((...........))....))))))). |
| CentroidFold | [ FASTA input ] | [ sec struct ] | (((((((....((.((.....)).))....))))))). |
| CentroidHomfold‑LAST | [ FASTA input ] | [ sec struct ] | (((((((.....(.((.....)).).....))))))). |
| ContextFold | [ FASTA input ] | [ sec struct ] | (((((((........((....)).......))))))). |
| Contrafold | [ FASTA input ] | [ sec struct ] | (((((((....((.((.....)).))....))))))). |
| Cylofold | [ FASTA input ] | [ sec struct ] | (((((............(((((.....)))))))))). |
| DotKnot | [ FASTA input ] | [ sec struct ] | (((.(((....))))))((((((...))))))...... |
| Fold | [ FASTA input ] | [ sec struct ] | (((.(((....))))))((((((...))))))...... |
| HotKnots | [ FASTA input ] | [ sec struct ] | (((.(((....)))...((((((...))))))..))). |
| IPknot | [ FASTA input ] | [ sec struct ] | (((((((....((.((.....)).))....))))))). |
| MCFold (ext) | [ FASTA input ] | [ sec struct ] | ((((((((((((((((.....)))))))))))))))). |
| MaxExpect | [ FASTA input ] | [ sec struct ] | (((((((....)......(((((...))))))))))). |
| McQFold | [ FASTA input ] | [ sec struct ] | (((((............((((((...))))))))))). |
| NanoFolder | [ FASTA input ] | [ sec struct ] | (((((((....((....))((((...))))))))))). |
| Pknots | [ FASTA input ] | [ sec struct ] | (((.(((....))))))(((((.....)))))...... |
| PknotsRG | [ FASTA input ] | [ sec struct ] | (((.(((....)))...((((((...))))))..))). |
| ProbKnot | [ FASTA input ] | [ sec struct ] | (((((.............(((((...))))).))))). |
| RDfolder | [ FASTA input ] | [ sec struct ] | (((((((....((((...))))........))))))). |
| RNASLOpt | [ FASTA input ] | [ sec struct ] | (((((((....((((...))))........))))))). |
| RNAfold | [ FASTA input ] | [ sec struct ] | (((.(((....)))...((((((...))))))..))). |
| RNAshapes | [ FASTA input ] | [ sec struct ] | (((.(((....)))...((((((...))))))..))). |
| RNAsubopt | [ FASTA input ] | [ sec struct ] | (((((((....))....((((((...))))))))))). |
| RNAwolf (ext) | [ FASTA input ] | [ sec struct ] | ((((((((..........((......)).)))))))). |
| Sfold | [ FASTA input ] | [ sec struct ] | (((((((....)))...((((((...)))))).)))). |
| UNAFold | [ FASTA input ] | [ sec struct ] | (((.(((....)))...((((((...))))))..))). |
| Vsfold4 | [ FASTA input ] | [ sec struct ] | (((((((..........(((......))).))))))). |
| Vsfold5 | [ FASTA input ] | [ sec struct ] | (((((((....(((.....)))........))))))). |