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RNA Secondary Structure Atlas - RNASTRAND - PDB_00584



RNA: PDB_00584
Rfam family: -

GGGAUGCGUAGGAUAGGUGGGAGCCGCAAGGCGCCGGUGAAAUACCACCCUUCCC
Reference structure (ext) [ sec struct ] ((((((.........(((((((((((..)))))..........))))))))))))
Afold [ FASTA input ] [ sec struct ] ((((...............((.(((....))).))((((......))))..))))
Alterna [ FASTA input ] [ sec struct ] ((((.....(((...((((............))))((((...))))..)))))))
CRWrnafold [ FASTA input ] [ sec struct ] ((((.....(((...((((...((((........))))....))))..)))))))
CentroidFold [ FASTA input ] [ sec struct ] (.........(((..((((((.(((....))).)..........)))))..))))
CentroidHomfold‑LAST [ FASTA input ] [ sec struct ] ..........(((..(((((..(((....)))............)))))..))).
ContextFold [ FASTA input ] [ sec struct ] ((((.(.........(((((..(((....)))............)))))).))))
Contrafold [ FASTA input ] [ sec struct ] (.........(((..((((((.(((....))).)..........)))))..))))
Cylofold [ FASTA input ] [ sec struct ] ((((...........(((((..(((....)))............)))))..))))
DotKnot [ FASTA input ] [ sec struct ] .....((((.[[[...((((...))))...)))).((((......))))..]]].
Fold [ FASTA input ] [ sec struct ] ..........(((..(((((..(((((.....).))))......)))))..))).
HotKnots [ FASTA input ] [ sec struct ] (((.((.(((.....(.(((..(((....))).))).)....)))))))).....
IPknot [ FASTA input ] [ sec struct ] ((((...............((.(((....))).))................))))
MCFold (ext) [ FASTA input ] [ sec struct ] ((((((((((((((((((((((((((..))))))))))).)))))))))))))))
MaxExpect [ FASTA input ] [ sec struct ] ..........(((..(((((..(((((.....).))))......)))))..))).
McQFold [ FASTA input ] [ sec struct ] ((((...........(((((..((((........))))......)))))..))))
NanoFolder [ FASTA input ] [ sec struct ] ((((.((((.[[.[({{{{{..{{{{....))))}}}}....)]}}}}}]]))))
Pknots [ FASTA input ] [ sec struct ] .((..((.........))[[[[(((....))).))((((......))))..]]]]
PknotsRG [ FASTA input ] [ sec struct ] ..........(((..(((((..(((....)))............)))))..))).
ProbKnot [ FASTA input ] [ sec struct ] ..........(((..(((((..(((((.....).))))......)))))..))).
RDfolder [ FASTA input ] [ sec struct ] ..........(((..(((((...(((........))).......)))))..))).
RNASLOpt [ FASTA input ] [ sec struct ] ((((.((((.......((((...))))...)))).((((......))))..))))
RNAfold [ FASTA input ] [ sec struct ] (((.((.(((.....(.(((..(((....))).))).)....)))))))).....
RNAshapes [ FASTA input ] [ sec struct ] ..........(((..(((((..(((....)))............)))))..))).
RNAsubopt [ FASTA input ] [ sec struct ] ..........(((..(((.((.(((....))).))((((...)))))))..))).
RNAwolf (ext) [ FASTA input ] [ sec struct ] (((.((.(((....(.(.((.(((((..))))))).).)...)))))))).....
Sfold [ FASTA input ] [ sec struct ] ......................(((....))).......................
UNAFold [ FASTA input ] [ sec struct ] ..........(((..(((((..(((....)))............)))))..))).
Vsfold4 [ FASTA input ] [ sec struct ] ((((.((((.....................)))).((((......))))..))))
Vsfold5 [ FASTA input ] [ sec struct ] ((((.((((.......(((.....)))...)))).((((......))))..))))