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RNA Secondary Structure Atlas - RNASTRAND - PDB_00611
RNA: PDB_00611
Rfam family:
-
| GGAUCGCAUUUGGACUUCUGCCCGGCACCACGGUCGGAUC | |||
| Reference structure (ext) | [ sec struct ] | .((((.......(((...((((.)))).....))).)))) | |
| Afold | [ FASTA input ] | [ sec struct ] | ((...(((..........)))(((((......))))).)) |
| Alterna | [ FASTA input ] | [ sec struct ] | .(((((((..........))).((((......)))))))) |
| CRWrnafold | [ FASTA input ] | [ sec struct ] | .(((((...((((........)))).....)))))..... |
| CentroidFold | [ FASTA input ] | [ sec struct ] | ................((((.(((......))).)))).. |
| CentroidHomfold‑LAST | [ FASTA input ] | [ sec struct ] | .................(((.(((......))).)))... |
| ContextFold | [ FASTA input ] | [ sec struct ] | .((((...(.(((..(........)..))).)....)))) |
| Contrafold | [ FASTA input ] | [ sec struct ] | ................((((.(((......))).)))).. |
| Cylofold | [ FASTA input ] | [ sec struct ] | .....(((..........)))(((((......)))))... |
| DotKnot | [ FASTA input ] | [ sec struct ] | ..........(((........[[[[[.)))..]]]]]... |
| Fold | [ FASTA input ] | [ sec struct ] | ((.((.......)))).(((.(((......))).)))... |
| HotKnots | [ FASTA input ] | [ sec struct ] | ................((((.(((......))).)))).. |
| IPknot | [ FASTA input ] | [ sec struct ] | .................(((..(([[....))]])))... |
| MCFold (ext) | [ FASTA input ] | [ sec struct ] | .(((((((((((..))))))).(((((....))))))))) |
| MaxExpect | [ FASTA input ] | [ sec struct ] | ....(.......)...((((.(((......))).)))).. |
| McQFold | [ FASTA input ] | [ sec struct ] | .....(((..........)))(((((......)))))... |
| Pknots | [ FASTA input ] | [ sec struct ] | .....(((..........)))(((((......)))))... |
| PknotsRG | [ FASTA input ] | [ sec struct ] | ((...(((..........)))[[[[[.))...]]]]]... |
| ProbKnot | [ FASTA input ] | [ sec struct ] | ((.((.......))))((((.(((......))).)))).. |
| RDfolder | [ FASTA input ] | [ sec struct ] | .....................(((((......)))))... |
| RNASLOpt | [ FASTA input ] | [ sec struct ] | .....................(((((......)))))... |
| RNAfold | [ FASTA input ] | [ sec struct ] | ................((((.(((......))).)))).. |
| RNAshapes | [ FASTA input ] | [ sec struct ] | ................((((.(((......))).)))).. |
| RNAsubopt | [ FASTA input ] | [ sec struct ] | ................((((.(((......))).)))).. |
| RNAwolf (ext) | [ FASTA input ] | [ sec struct ] | (.(((.((..)))))......(((..(((..))))))).. |
| Sfold | [ FASTA input ] | [ sec struct ] | ................((((.(((......))).)))).. |
| UNAFold | [ FASTA input ] | [ sec struct ] | ................((((.(((......))).)))).. |
| Vsfold4 | [ FASTA input ] | [ sec struct ] | .(((((...((((........)))).....)))))..... |
| Vsfold5 | [ FASTA input ] | [ sec struct ] | (((.....)))..........(((((......)))))... |