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RNA Secondary Structure Atlas - RNASTRAND - PDB_00710
RNA: PDB_00710
Rfam family:
-
| GACGAGCCGACGAGCCGACGAGCCGACGAGCCGACGAGCC | |||
| Reference structure (ext) | [ sec struct ] | (((((((())))))))(((((((())))))))........ | |
| Afold | [ FASTA input ] | [ sec struct ] | (.((.((((.((.((......)))).)).))))......) |
| Alterna | [ FASTA input ] | [ sec struct ] | .....((((.((.((((.((...)).)).)))).)).)). |
| CRWrnafold | [ FASTA input ] | [ sec struct ] | .....((((.((.((((.((...)).)).)))).)).)). |
| CentroidFold | [ FASTA input ] | [ sec struct ] | ........................................ |
| CentroidHomfold‑LAST | [ FASTA input ] | [ sec struct ] | ........................................ |
| ContextFold | [ FASTA input ] | [ sec struct ] | (.(..(.((.(..(.((......)).)..).)).)..).) |
| Contrafold | [ FASTA input ] | [ sec struct ] | .......((.((.((......)))).))............ |
| Cylofold | [ FASTA input ] | [ sec struct ] | ........................................ |
| DotKnot | [ FASTA input ] | [ sec struct ] | ........................................ |
| Fold | [ FASTA input ] | [ sec struct ] | .....((((.((.((((.((...)).)).)))).)).)). |
| HotKnots | [ FASTA input ] | [ sec struct ] | ..((.((((.((.((......)))).)).))))....... |
| IPknot | [ FASTA input ] | [ sec struct ] | ........................................ |
| MCFold (ext) | [ FASTA input ] | [ sec struct ] | (((((((((((((((((((..))))))))))))))))))) |
| MaxExpect | [ FASTA input ] | [ sec struct ] | .....((((.((.((((.((...)).)).)))).)).)). |
| McQFold | [ FASTA input ] | [ sec struct ] | ........................................ |
| Pknots | [ FASTA input ] | [ sec struct ] | ..((.((......)))).((.((......))))....... |
| PknotsRG | [ FASTA input ] | [ sec struct ] | ..((.((((.((.((......)))).)).))))....... |
| ProbKnot | [ FASTA input ] | [ sec struct ] | .....((((.((.((((.........)).)))).)).)). |
| RDfolder | [ FASTA input ] | [ sec struct ] | ........................................ |
| RNASLOpt | [ FASTA input ] | [ sec struct ] | ........................................ |
| RNAfold | [ FASTA input ] | [ sec struct ] | ..((.((((.((.((......)))).)).))))....... |
| RNAshapes | [ FASTA input ] | [ sec struct ] | ..((.((((.((.((......)))).)).))))....... |
| RNAsubopt | [ FASTA input ] | [ sec struct ] | ..((.((((.((.((......)))).)).))))....... |
| RNAwolf (ext) | [ FASTA input ] | [ sec struct ] | ..(......)(......)(......)((........)).. |
| Sfold | [ FASTA input ] | [ sec struct ] | .....((((.((.((......)))).)).))......... |
| UNAFold | [ FASTA input ] | [ sec struct ] | .....((((.((.((((.((...)).)).)))).)).)). |
| Vsfold4 | [ FASTA input ] | [ sec struct ] | ........................................ |
| Vsfold5 | [ FASTA input ] | [ sec struct ] | .....((((.((...)).((.((......)))).)).)). |