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RNA Secondary Structure Atlas - RNASTRAND - PDB_00810
RNA: PDB_00810
Rfam family:
s2m
| GGAGUUCACCGAGGCCACGCGGAGUACGAUCGAGGGUACAGUGAAUU | |||
| Reference structure (ext) | [ sec struct ] | ..((((((((...(((((((((...)))..)).))))..)))))))) | |
| Afold | [ FASTA input ] | [ sec struct ] | ((..(((((....(((.((((.....))..))..)))...))))))) |
| Alterna | [ FASTA input ] | [ sec struct ] | ..(((((((.(...........................).))))))) |
| CMfinder(seed) | [ FASTA input ] | [ sec struct ] | ....(((((....(((...((.....))......)))...))))).. |
| CMfinder(20) | [ FASTA input ] | [ sec struct ] | ....(((((....(((...((.....))......)))...))))).. |
| CRWrnafold | [ FASTA input ] | [ sec struct ] | ..(((((((....(((...(((.......)))..)))...))))))) |
| Carnac(seed) | [ FASTA input ] | [ sec struct ] | ..(((((((...............................))))))) |
| Carnac(20) | [ FASTA input ] | [ sec struct ] | ..(((((((...............................))))))) |
| CentroidAlifold(seed) | [ FASTA input ] | [ sec struct ] | ...((((((.(..(((.((((.....))..))..))).).)))))). |
| CentroidAlifold(20) | [ FASTA input ] | [ sec struct ] | ...((((((.(..(((.((((.....))..))..))).).)))))). |
| CentroidFold | [ FASTA input ] | [ sec struct ] | ..(((((((.(..(((.((...........)).)).).).))))))) |
| CentroidHomfold‑LAST | [ FASTA input ] | [ sec struct ] | ....(((((....(((.((((.....))..))..)))...))))).. |
| ContextFold | [ FASTA input ] | [ sec struct ] | ..(((((((....(((.((((.....))..))..)))...))))))) |
| Contrafold | [ FASTA input ] | [ sec struct ] | ..(((((((.(..(((.((((.....))..)).)).).).))))))) |
| Cylofold | [ FASTA input ] | [ sec struct ] | ..(((((((..............((((........)))).))))))) |
| DAFS(seed) | [ FASTA input ] | [ sec struct ] | (...(((((....(((.((((.....))..))..)))...))).))) |
| DAFS(20) | [ FASTA input ] | [ sec struct ] | (..((.(((....(((.((((.....))..))..)))...))).))) |
| DotKnot | [ FASTA input ] | [ sec struct ] | ........(((....[[[.))).((((........)))).]]].... |
| Fold | [ FASTA input ] | [ sec struct ] | ..(((((((....(((.((((.....))..))..)))...))))))) |
| HotKnots | [ FASTA input ] | [ sec struct ] | ..(((((((.(.(.((.((((.....))..)).)).).).))))))) |
| IPknot | [ FASTA input ] | [ sec struct ] | ..(((((((....(((.((((.....))..))..)))...))))))) |
| MCFold (ext) | [ FASTA input ] | [ sec struct ] | ..((((((((((((((((((((...)))..))))))))))))))))) |
| MXScarna(seed) | [ FASTA input ] | [ sec struct ] | .(...((((.(..(((.((((.....))..))..))).).)))).). |
| MXScarna(20) | [ FASTA input ] | [ sec struct ] | .(...((((.(..(((.((((.....))..))..))).).)))).). |
| Mastr(seed) | [ FASTA input ] | [ sec struct ] | (((((...(.(..(((...((.....))......))).).)))))). |
| Mastr(20) | [ FASTA input ] | [ sec struct ] | ((((...((.(..(((...((.....))......))).).)))))). |
| MaxExpect | [ FASTA input ] | [ sec struct ] | ...((((((....(((.((((.....))..))..)))...)))))). |
| McQFold | [ FASTA input ] | [ sec struct ] | ..(((((((..............((((........)))).))))))) |
| Multilign(20) | [ FASTA input ] | [ sec struct ] | ..(((((((....(((...(((.......)))..)))...))))))) |
| Murlet(seed) | [ FASTA input ] | [ sec struct ] | .(((...((....(((.((((.....))..))..)))...)).))). |
| Murlet(20) | [ FASTA input ] | [ sec struct ] | .(((...((.(.(.((.((((.....))..)).)).).).)).))). |
| PETfold_2.0(seed) | [ FASTA input ] | [ sec struct ] | ...((((((....(((.((((.....))..))..)))...)))))). |
| PETfold_2.0(20) | [ FASTA input ] | [ sec struct ] | ....(((((....(((.((((.....))..))..)))...))))).. |
| PETfold_pre2.0(seed) | [ FASTA input ] | [ sec struct ] | ...((((((....(((.((((.....))..))..)))...)))))). |
| PETfold_pre2.0(20) | [ FASTA input ] | [ sec struct ] | ....(((((....(((.((((.....))..))..)))...))))).. |
| PPfold(20) | [ FASTA input ] | [ sec struct ] | ....(((((.....((.((((.....))..))..))....))))).. |
| Pknots | [ FASTA input ] | [ sec struct ] | ..(((((((((........))..((((........)))).))))))) |
| PknotsRG | [ FASTA input ] | [ sec struct ] | ..(((((((....(((.((((.....))..))..)))...))))))) |
| ProbKnot | [ FASTA input ] | [ sec struct ] | ..(((((((....(((..................)))...))))))) |
| RDfolder | [ FASTA input ] | [ sec struct ] | ........(((........)))......................... |
| RNASLOpt | [ FASTA input ] | [ sec struct ] | ..(((((((..............((((........)))).))))))) |
| RNASampler(seed) | [ FASTA input ] | [ sec struct ] | .............(((..................))).......... |
| RNASampler(20) | [ FASTA input ] | [ sec struct ] | ...((((((...............................)))))). |
| RNAalifold(seed) | [ FASTA input ] | [ sec struct ] | ....(((((....(((.((((.....))..))..)))...))))).. |
| RNAalifold(20) | [ FASTA input ] | [ sec struct ] | ....(((((.(.(.((.((((.....))..)).)).).).))))).. |
| RNAfold | [ FASTA input ] | [ sec struct ] | ..(((((((.(.(.((.((((.....))..)).)).).).))))))) |
| RNAshapes | [ FASTA input ] | [ sec struct ] | ..(((((((....(((.((((.....))..))..)))...))))))) |
| RNAsubopt | [ FASTA input ] | [ sec struct ] | ..(((((((((.(....).))).((((........))))..)))))) |
| RNAwolf (ext) | [ FASTA input ] | [ sec struct ] | ....((((((...(((.(((........).)).)))...)))))).. |
| RSpredict(seed) | [ FASTA input ] | [ sec struct ] | ..((((.((....(((...((.....))......)))...)).)))) |
| RSpredict(20) | [ FASTA input ] | [ sec struct ] | .....((((....(((...((.....))......)))...))).).. |
| Sfold | [ FASTA input ] | [ sec struct ] | ..(((((((....(((..................)))...))))))) |
| TurboFold(20) | [ FASTA input ] | [ sec struct ] | ...((((((....(((.((((.....))..))..)))...)))))). |
| UNAFold | [ FASTA input ] | [ sec struct ] | ..(((((((....(((.((((.....))..))..)))...))))))) |
| Vsfold4 | [ FASTA input ] | [ sec struct ] | ...((((((..............((((........)))).)))))). |
| Vsfold5 | [ FASTA input ] | [ sec struct ] | ...((((((..............((((........)))).)))))). |