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RNA Secondary Structure Atlas - RNASTRAND - PDB_00815
RNA: PDB_00815
Rfam family:
-
| AUGCUCAUGCACUGCAUGAAUGCCCCUAAGGGAUGC | |||
| Reference structure (ext) | [ sec struct ] | ....(((((.....)))))....((((.)))).... | |
| Afold | [ FASTA input ] | [ sec struct ] | (...((((((...))))))...(((....)))...) |
| Alterna | [ FASTA input ] | [ sec struct ] | ..((((((((...))))))....(((...)))..)) |
| CRWrnafold | [ FASTA input ] | [ sec struct ] | ....((((((...))))))...(((....))).... |
| CentroidFold | [ FASTA input ] | [ sec struct ] | ....((((((...))))))...(((....))).... |
| CentroidHomfold‑LAST | [ FASTA input ] | [ sec struct ] | ....((((((...))))))...(((....))).... |
| ContextFold | [ FASTA input ] | [ sec struct ] | ........................((....)).... |
| Contrafold | [ FASTA input ] | [ sec struct ] | ....((((((...))))))...(((....))).... |
| Cylofold | [ FASTA input ] | [ sec struct ] | ....((((((...))))))...(((....))).... |
| DotKnot | [ FASTA input ] | [ sec struct ] | ((((.[[[.....))))..]]](((....))).... |
| Fold | [ FASTA input ] | [ sec struct ] | ..((((((((...))))))..))(((...))).... |
| HotKnots | [ FASTA input ] | [ sec struct ] | ....((((((...))))))...(((....))).... |
| IPknot | [ FASTA input ] | [ sec struct ] | ....((((((...))))))...(((....))).... |
| MCFold (ext) | [ FASTA input ] | [ sec struct ] | ((..((((((...))))))))(((((...)))..)) |
| MaxExpect | [ FASTA input ] | [ sec struct ] | ....((((((...))))))...(((....))).... |
| McQFold | [ FASTA input ] | [ sec struct ] | ....((((((...))))))....(((...))).... |
| Pknots | [ FASTA input ] | [ sec struct ] | ....(((((.....)))))...(((....))).... |
| PknotsRG | [ FASTA input ] | [ sec struct ] | ....((((((...))))))...(((....))).... |
| ProbKnot | [ FASTA input ] | [ sec struct ] | ....((((((...))))))((.(((....))))).. |
| RDfolder | [ FASTA input ] | [ sec struct ] | ....((((((...))))))................. |
| RNASLOpt | [ FASTA input ] | [ sec struct ] | ....((((((...))))))................. |
| RNAfold | [ FASTA input ] | [ sec struct ] | ....((((((...))))))...(((....))).... |
| RNAshapes | [ FASTA input ] | [ sec struct ] | ....((((((...))))))...(((....))).... |
| RNAsubopt | [ FASTA input ] | [ sec struct ] | ..((((((((...))))))...(((....)))..)) |
| RNAwolf (ext) | [ FASTA input ] | [ sec struct ] | ...(((((((...)))))).....(((..))))... |
| Sfold | [ FASTA input ] | [ sec struct ] | ....((((((...))))))...(((....))).... |
| UNAFold | [ FASTA input ] | [ sec struct ] | ....((((((...))))))...(((....))).... |
| Vsfold4 | [ FASTA input ] | [ sec struct ] | ....(((((.....)))))................. |
| Vsfold5 | [ FASTA input ] | [ sec struct ] | ....(((((.....)))))................. |