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RNA Secondary Structure Atlas - RNASTRAND - PDB_00863



RNA: PDB_00863
Rfam family: -

UUGCGUCACACCGGUGAAGUCGCUGCGUCACACCGGUGAAGUCGC
Reference structure (ext) [ sec struct ] ..(((((.((((((((..(((((.))))).))))))))..)))))
Alterna [ FASTA input ] [ sec struct ] ..(((...(((((((((.((....)).)))..))))))....)))
CRWrnafold [ FASTA input ] [ sec struct ] ..(((...((((((((..............))))))))....)))
CentroidFold [ FASTA input ] [ sec struct ] ..(((.(.((((((((..(.((...)).).))))))))..).)))
CentroidHomfold‑LAST [ FASTA input ] [ sec struct ] ..(((.(.((((((((..(.((...)).).))))))))..).)))
ContextFold [ FASTA input ] [ sec struct ] ...((.(.((((((((..............))))))))..).)).
Contrafold [ FASTA input ] [ sec struct ] ..(((.(.((((((((..(.(((.))).).))))))))..).)))
Cylofold [ FASTA input ] [ sec struct ] ..(((...[[[[[[[[....))).(((...]]]]]]]]....)))
DotKnot [ FASTA input ] [ sec struct ] ..(((...[[[[[[[[....))).......]]]]]]]].......
Fold [ FASTA input ] [ sec struct ] ..(((...((((((((....((...))...))))))))....)))
HotKnots [ FASTA input ] [ sec struct ] ..(((.(.((((((((..(.((...)).).))))))))..).)))
IPknot [ FASTA input ] [ sec struct ] ..(((...((((((((....((...))...))))))))....)))
MCFold (ext) [ FASTA input ] [ sec struct ] ..(((((((((((((((.((((...)))))))))))))).)))))
MaxExpect [ FASTA input ] [ sec struct ] ..(((...((((((((.....(...)....))))))))....)))
McQFold [ FASTA input ] [ sec struct ] ..(((...((((((((..............))))))))....)))
Pknots [ FASTA input ] [ sec struct ] ........((((((((..............)))))))).......
PknotsRG [ FASTA input ] [ sec struct ] ..(((...((((((((..((....))....))))))))....)))
ProbKnot [ FASTA input ] [ sec struct ] ..((((..((((((((..............))))))))..).)))
RDfolder [ FASTA input ] [ sec struct ] ..(((...((((((((..............))))))))....)))
RNASLOpt [ FASTA input ] [ sec struct ] ........((((((((..............)))))))).......
RNAfold [ FASTA input ] [ sec struct ] ..(((.(.((((((((..(.((...)).).))))))))..).)))
RNAshapes [ FASTA input ] [ sec struct ] ..(((...((((((((..((....))....))))))))....)))
RNAsubopt [ FASTA input ] [ sec struct ] ..(((.(.((((((((..(.((...)).).))))))))..).)))
RNAwolf (ext) [ FASTA input ] [ sec struct ] ..(((.(.((((((((.(...........)))))))))))))...
Sfold [ FASTA input ] [ sec struct ] ..(((.(.((((((((....(.....)...))))))))..).)))
UNAFold [ FASTA input ] [ sec struct ] ..(((...((((((((..((....))....))))))))....)))
Vsfold4 [ FASTA input ] [ sec struct ] ........((((((((..((....))....)))))))).......
Vsfold5 [ FASTA input ] [ sec struct ] ..((((..[[[[[[[[........))))..]]]]]]]].......