 | ||||||||||||||
| ||||||||||||||
 | ||||||||||||||
RNA Secondary Structure Atlas - RNASTRAND - PDB_00892
RNA: PDB_00892
Rfam family:
-
| CUGCUGCUGCUGCUGCUGCUGCUGCUGCUGCUGCUGCUGCUGCUGCUGCUGCUGCUGCUGCUGCUGCUGCUG | |||
| Reference structure (ext) | [ sec struct ] | ((((.((...((............))...)).))))...........((((((()))))))........... | |
| Afold | [ FASTA input ] | [ sec struct ] | (.((.((.((.((.((.((.((.((.((.((.((....)).)).)).)).)).)).)).)).)).)).).)) |
| Alterna | [ FASTA input ] | [ sec struct ] | ..((.((.((.((.((.((.((.((.((.((.((....)).)).)).)).)).)).)).)).)).)).)).. |
| CRWrnafold | [ FASTA input ] | [ sec struct ] | ..((.((.((.((.((.((.((.((.((.((.((....)).)).)).)).)).)).)).)).)).)).)).. |
| CentroidFold | [ FASTA input ] | [ sec struct ] | ...(.((.((.((.((.((.((.((.((.((.((....)).)).)).)).)).)).)).)).)).)).)... |
| CentroidHomfold‑LAST | [ FASTA input ] | [ sec struct ] | ........................................................................ |
| ContextFold | [ FASTA input ] | [ sec struct ] | .......................................(.((.((.((.((.......)).)).)).)).) |
| Contrafold | [ FASTA input ] | [ sec struct ] | ..((.((.((.((.((.((.((.((.((.((.((....)).)).)).)).)).)).)).)).)).)).)).. |
| Cylofold | [ FASTA input ] | [ sec struct ] | ........................................................................ |
| DotKnot | [ FASTA input ] | [ sec struct ] | ........................................................................ |
| Fold | [ FASTA input ] | [ sec struct ] | ..((.((.((.((.((.((.((.((.((.((.((....)).)).)).)).)).)).)).)).)).)).)).. |
| HotKnots | [ FASTA input ] | [ sec struct ] | ..((.((.((.((.((.((.((.((.((.((.((....)).)).)).)).)).)).)).)).)).)).)).. |
| IPknot | [ FASTA input ] | [ sec struct ] | ..((.((.((.((.((.((.((.((.((.((.((....)).)).)).)).)).)).)).)).)).)).)).. |
| MCFold (ext) | [ FASTA input ] | [ sec struct ] | ((((((((((((((((((((((((((((((((((....)))))))))))))))))))))))))))))))))) |
| MaxExpect | [ FASTA input ] | [ sec struct ] | ..((.((.((.((.((.((.((.((.((.((.((....)).)).)).)).)).)).)).)).)).)).)).. |
| McQFold | [ FASTA input ] | [ sec struct ] | ........................................................................ |
| Pknots | [ FASTA input ] | [ sec struct ] | ..((....)).((....)).((....)).((....)).((....)).((....)).((.[[.))....]].. |
| PknotsRG | [ FASTA input ] | [ sec struct ] | ..((.((.((.((.((.((.((.((.((.((.((....)).)).)).)).)).)).)).)).)).)).)).. |
| ProbKnot | [ FASTA input ] | [ sec struct ] | .(((................................................................)).) |
| RDfolder | [ FASTA input ] | [ sec struct ] | ........................................................................ |
| RNASLOpt | [ FASTA input ] | [ sec struct ] | ........................................................................ |
| RNAfold | [ FASTA input ] | [ sec struct ] | ..((.((.((.((.((.((.((.((.((.((.((....)).)).)).)).)).)).)).)).)).)).)).. |
| RNAshapes | [ FASTA input ] | [ sec struct ] | ..((.((.((.((.((.((.((.((.((.((.((....)).)).)).)).)).)).)).)).)).)).)).. |
| RNAsubopt | [ FASTA input ] | [ sec struct ] | ..((.((.((.((.((.((.((.((.((.((.((....)).)).)).)).)).)).)).)).)).)).)).. |
| RNAwolf (ext) | [ FASTA input ] | [ sec struct ] | ..((..........)).((.............)).((.............)).((.............)).. |
| Sfold | [ FASTA input ] | [ sec struct ] | ..((.((.((.((.((.((.((.((.((.((.((....)).)).)).)).)).)).)).)).)).)).)).. |
| UNAFold | [ FASTA input ] | [ sec struct ] | ..((.((.((.((.((.((.((.((.((.((.((....)).)).)).)).)).)).)).)).)).)).)).. |
| Vsfold4 | [ FASTA input ] | [ sec struct ] | ........................................................................ |
| Vsfold5 | [ FASTA input ] | [ sec struct ] | ..((.((.((....)).((....)).)).((.((....)).((.((....)).((....)).)).)).)).. |