RNA Secondary Structure Atlas - RNASTRAND - PDB_00943

RNA: PDB_00943
Rfam family: -

			UUGACUACGGAUCAAUUGACUACGGAUCAAGACUACGGUUUGACUACGGAUCAA
Reference structure (ext)		[ sec struct ]	(((((.....)))))(((((.....))))).........(((((.....)))))
Afold	[ FASTA input ]	[ sec struct ]	((((...((..(((.(((((....).))))(((....))))))...))..))))
Alterna	[ FASTA input ]	[ sec struct ]	((((...((..((((((((.......)))).........))))...))..))))
CRWrnafold	[ FASTA input ]	[ sec struct ]	.........((((...((....((((((........))))))..))..))))..
CentroidFold	[ FASTA input ]	[ sec struct ]	...........................(.............)............
CentroidHomfold‑LAST	[ FASTA input ]	[ sec struct ]	......................................................
ContextFold	[ FASTA input ]	[ sec struct ]	.(((...(...((....))...((.....((((....)))).....))).))).
Contrafold	[ FASTA input ]	[ sec struct ]	..((.......))....(.....(..(((((.......)))))...)....)..
Cylofold	[ FASTA input ]	[ sec struct ]	.........((((...........)))).((((....)))).............
DotKnot	[ FASTA input ]	[ sec struct ]	........................((((.((((....)))).......))))..
Fold	[ FASTA input ]	[ sec struct ]	((((.......)))).(((((..((.(((.(((....))))))))..)).))).
HotKnots	[ FASTA input ]	[ sec struct ]	(((((....).)))).(((...((.....((((....)))).....))..))).
IPknot	[ FASTA input ]	[ sec struct ]	((((.......)))).(((.......(((.(((....)))))).......))).
MCFold (ext)	[ FASTA input ]	[ sec struct ]	((((((..)).))))((((.(((((((((((((...))))))).))))))))))
MaxExpect	[ FASTA input ]	[ sec struct ]	.(((.......)))..(((...((..(((.(((....))))))...))..))).
McQFold	[ FASTA input ]	[ sec struct ]	.........((((...........))))........((((((....))))))..
Pknots	[ FASTA input ]	[ sec struct ]	(((((....).))))(((((....).)))).((....))(((((....).))))
PknotsRG	[ FASTA input ]	[ sec struct ]	...............((((...((.....((((....)))).....))..))))
ProbKnot	[ FASTA input ]	[ sec struct ]	((((.......))))(((((....(.(((.(((....)))))))....).))))
RDfolder	[ FASTA input ]	[ sec struct ]	.......((((((..((((.......))))......))))))............
RNASLOpt	[ FASTA input ]	[ sec struct ]	.........((((.........((((((........))))))......))))..
RNAfold	[ FASTA input ]	[ sec struct ]	(((((....).)))).(((...((.....((((....)))).....))..))).
RNAshapes	[ FASTA input ]	[ sec struct ]	...............((((...((.....((((....)))).....))..))))
RNAsubopt	[ FASTA input ]	[ sec struct ]	(((((....).))))((((...((.....((((....)))).....))..))))
RNAwolf (ext)	[ FASTA input ]	[ sec struct ]	((((..(..(..(((((((((..)).)))).(((..))))))...)..).))))
Sfold	[ FASTA input ]	[ sec struct ]	.((((....).)))..(((...((..((..(((....))).))...))..))).
UNAFold	[ FASTA input ]	[ sec struct ]	...............((((...((.....((((....)))).....))..))))
Vsfold4	[ FASTA input ]	[ sec struct ]	.(((((...((((...........)))).((((....))))......)).))).
Vsfold5	[ FASTA input ]	[ sec struct ]	.(((((..((.((....))))..)).))).(((....)))(((.......))).

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