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RNA Secondary Structure Atlas - RNASTRAND - PDB_00945
RNA: PDB_00945
Rfam family:
-
| CAGCACUGAUUGCGGUCGAGGUAGCUUGAUG | |||
| Reference structure (ext) | [ sec struct ] | .((((.....))))((((((....)))))). | |
| Afold | [ FASTA input ] | [ sec struct ] | (((((.....)))..(((((....))))))) |
| Alterna | [ FASTA input ] | [ sec struct ] | (((((.....)))..(((((....))))))) |
| CRWrnafold | [ FASTA input ] | [ sec struct ] | ..(((.....))).((((((....)))))). |
| CentroidFold | [ FASTA input ] | [ sec struct ] | ..............((((((....)))))). |
| CentroidHomfold‑LAST | [ FASTA input ] | [ sec struct ] | ...............(((((....))))).. |
| ContextFold | [ FASTA input ] | [ sec struct ] | ..(((.....))).((((((....)))))). |
| Contrafold | [ FASTA input ] | [ sec struct ] | ..((.......)).((((((....)))))). |
| Cylofold | [ FASTA input ] | [ sec struct ] | ..(((.....))).((((((....)))))). |
| DotKnot | [ FASTA input ] | [ sec struct ] | ..(((.....))).((((((....)))))). |
| Fold | [ FASTA input ] | [ sec struct ] | ..(((.....))).((((((....)))))). |
| HotKnots | [ FASTA input ] | [ sec struct ] | ..(((.....))).((((((....)))))). |
| IPknot | [ FASTA input ] | [ sec struct ] | ..(([[.....)).((((((]]..)))))). |
| MCFold (ext) | [ FASTA input ] | [ sec struct ] | ((((((((((((((..)))))))))).)))) |
| MaxExpect | [ FASTA input ] | [ sec struct ] | ..(((.....))).((((((....)))))). |
| McQFold | [ FASTA input ] | [ sec struct ] | ..(((.....))).((((((....)))))). |
| Pknots | [ FASTA input ] | [ sec struct ] | ..(((.....))).((((((....)))))). |
| PknotsRG | [ FASTA input ] | [ sec struct ] | ...........((.[[[[[[))..]]]]]]. |
| ProbKnot | [ FASTA input ] | [ sec struct ] | ..(((.....))).((((((....)))))). |
| RDfolder | [ FASTA input ] | [ sec struct ] | ...............(((((....))))).. |
| RNASLOpt | [ FASTA input ] | [ sec struct ] | ..............((((((....)))))). |
| RNAfold | [ FASTA input ] | [ sec struct ] | ..(((.....))).((((((....)))))). |
| RNAshapes | [ FASTA input ] | [ sec struct ] | ..(((.....))).((((((....)))))). |
| RNAsubopt | [ FASTA input ] | [ sec struct ] | ..(((.....))).((((((....)))))). |
| RNAwolf (ext) | [ FASTA input ] | [ sec struct ] | ((...((...))...((((((..)))))))) |
| Sfold | [ FASTA input ] | [ sec struct ] | ..(((.....))).((((((....)))))). |
| UNAFold | [ FASTA input ] | [ sec struct ] | ..(((.....))).((((((....)))))). |
| Vsfold4 | [ FASTA input ] | [ sec struct ] | .....(((....))).((((....))))... |
| Vsfold5 | [ FASTA input ] | [ sec struct ] | .....(((....))).((((....))))... |