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RNA Secondary Structure Atlas - RNASTRAND - PDB_01162
RNA: PDB_01162
Rfam family:
-
| AGGUGGUGGAAUUGGUAGACACGCUACCGGUAGUUACGGGUUCAAGUCCCGUCCUC | |||
| Reference structure (ext) | [ sec struct ] | ........................(((())))...(((((.......))))).... | |
| Afold | [ FASTA input ] | [ sec struct ] | ((((((((.............))))))).......(((((.......)))))...) |
| Alterna | [ FASTA input ] | [ sec struct ] | (((((((((.((((((((.....))))))))..)))............))).))). |
| CRWrnafold | [ FASTA input ] | [ sec struct ] | .(((((((.............))))))).......(((((.......))))).... |
| CentroidFold | [ FASTA input ] | [ sec struct ] | ...........(((((((.....))))))).....(((((.......))))).... |
| CentroidHomfold‑LAST | [ FASTA input ] | [ sec struct ] | .............(((((.....))))).......(((((.......))))).... |
| ContextFold | [ FASTA input ] | [ sec struct ] | ..........((((((((.....))))))))....(((((.......))))).... |
| Contrafold | [ FASTA input ] | [ sec struct ] | ..........((((((((.....))))))))....(((((.......))))).... |
| Cylofold | [ FASTA input ] | [ sec struct ] | .(((((((.............))))))).......(((((.......))))).... |
| DotKnot | [ FASTA input ] | [ sec struct ] | .(((((((.[[[[........)))))))...]]]](((((.......))))).... |
| Fold | [ FASTA input ] | [ sec struct ] | .(((((((.............))))))).......(((((.......))))).... |
| HotKnots | [ FASTA input ] | [ sec struct ] | .(((((((.............))))))).......(((((.......))))).... |
| IPknot | [ FASTA input ] | [ sec struct ] | ......((..[[[[[[[[...))]]]]]]]]....(((((.......))))).... |
| MCFold (ext) | [ FASTA input ] | [ sec struct ] | ((((((.((((((((((((...))))((((((..)))))).)))))))))))))). |
| MaxExpect | [ FASTA input ] | [ sec struct ] | .(((((((.............))))))).......(((((.......))))).... |
| McQFold | [ FASTA input ] | [ sec struct ] | .(((((((.............))))))).......(((((.......))))).... |
| Pknots | [ FASTA input ] | [ sec struct ] | .(((((((.............))))))).......(((((.......))))).... |
| PknotsRG | [ FASTA input ] | [ sec struct ] | .(((((((.............))))))).......(((((.......))))).... |
| ProbKnot | [ FASTA input ] | [ sec struct ] | .(((((((.............))))))).......((((((....).))))).... |
| RDfolder | [ FASTA input ] | [ sec struct ] | (((.......((((((((.....))))))))....(((((.......)))))))). |
| RNASLOpt | [ FASTA input ] | [ sec struct ] | .(((((((.............))))))).......(((((.......))))).... |
| RNAfold | [ FASTA input ] | [ sec struct ] | .(((((((.............))))))).......(((((.......))))).... |
| RNAshapes | [ FASTA input ] | [ sec struct ] | .(((((((.............))))))).......(((((.......))))).... |
| RNAsubopt | [ FASTA input ] | [ sec struct ] | .(((((((.............)))))))((.....(((((.......))))))).. |
| RNAwolf (ext) | [ FASTA input ] | [ sec struct ] | ((((((.(((((((..(.((..)).(((.(((..)))))).)))))))))))))). |
| Sfold | [ FASTA input ] | [ sec struct ] | .(((((((.............))))))).......(((((.......))))).... |
| UNAFold | [ FASTA input ] | [ sec struct ] | .(((((((.............))))))).......(((((.......))))).... |
| Vsfold4 | [ FASTA input ] | [ sec struct ] | .(((((((.............))))))).......(((((.......))))).... |
| Vsfold5 | [ FASTA input ] | [ sec struct ] | .(((((((.............))))))).......(((((.......))))).... |