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RNA Secondary Structure Atlas - RNASTRAND - PDB_01194



RNA: PDB_01194
Rfam family: -

GGAGCCUGGGAGCUCCCACGGUCCCAGACGUG
Reference structure (ext) [ sec struct ] ((((([[[[[.)))))(((((.]]]]])))))
Alterna [ FASTA input ] [ sec struct ] ((.(((.(((....)))..))).)).......
CRWrnafold [ FASTA input ] [ sec struct ] ...((((((((..........))))))..)).
CentroidFold [ FASTA input ] [ sec struct ] ((.(((((((....)))).))).)).......
CentroidHomfold‑LAST [ FASTA input ] [ sec struct ] ((.(((((((....)))).))).)).......
ContextFold [ FASTA input ] [ sec struct ] (((((......)))))((((........))))
Contrafold [ FASTA input ] [ sec struct ] ((.((((((((()))))).))).)).......
Cylofold [ FASTA input ] [ sec struct ] ((((([[[[[.)))))((((..]]]]].))))
DotKnot [ FASTA input ] [ sec struct ] (((((......)))))((((........))))
Fold [ FASTA input ] [ sec struct ] (((((......)))))((((........))))
HotKnots [ FASTA input ] [ sec struct ] ((((([[[[[[)))))((((.]]]]]].))))
IPknot [ FASTA input ] [ sec struct ] .....((((((..........)))))).....
MCFold (ext) [ FASTA input ] [ sec struct ] ((((((...).)))))((((.((...))))))
MaxExpect [ FASTA input ] [ sec struct ] (((((......)))))((((........))))
McQFold [ FASTA input ] [ sec struct ] ((((.[[[[[[.))))((((.]]]]]].))))
Pknots [ FASTA input ] [ sec struct ] (((((......)))))((((........))))
PknotsRG [ FASTA input ] [ sec struct ] (((((.[[[[[))))).....]]]]]......
ProbKnot [ FASTA input ] [ sec struct ] (((((......)))))((((.((...))))))
RDfolder [ FASTA input ] [ sec struct ] .....((((((..........)))))).....
RNASLOpt [ FASTA input ] [ sec struct ] (((((......)))))((((........))))
RNAfold [ FASTA input ] [ sec struct ] ((..((((((....)))).))..)).......
RNAshapes [ FASTA input ] [ sec struct ] ((..((((((....)))).))..)).......
RNAsubopt [ FASTA input ] [ sec struct ] ((..((((((....)))).))..)).......
RNAwolf (ext) [ FASTA input ] [ sec struct ] (((((......)))))(((.(((...))))))
Sfold [ FASTA input ] [ sec struct ] ((..((((((....)))).))..)).......
UNAFold [ FASTA input ] [ sec struct ] ((..((((((....)))).))..)).......
Vsfold4 [ FASTA input ] [ sec struct ] .....((((((.((.....)))))))).....
Vsfold5 [ FASTA input ] [ sec struct ] (((((.[[[[[))))).....]]]]]......