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RNA Secondary Structure Atlas - RNASTRAND - PDB_01337
RNA: PDB_01337
Rfam family:
-
| CCGGAGGAUCACCACGGGCGGAGGAUCACCACGG | |||
| Reference structure (ext) | [ sec struct ] | ((((.((....)))))).(((.((....))))). | |
| Afold | [ FASTA input ] | [ sec struct ] | ((((..((((.((......))..))))..).))) |
| Alterna | [ FASTA input ] | [ sec struct ] | (((..((.((.((...))..))......)).))) |
| CRWrnafold | [ FASTA input ] | [ sec struct ] | (((...((((.............))))....))) |
| CentroidFold | [ FASTA input ] | [ sec struct ] | (((...((((.............))))....))) |
| CentroidHomfold‑LAST | [ FASTA input ] | [ sec struct ] | .................................. |
| ContextFold | [ FASTA input ] | [ sec struct ] | (((....(((.((......))..))).....))) |
| Contrafold | [ FASTA input ] | [ sec struct ] | (((..(((((.((......))..)))).)..))) |
| Cylofold | [ FASTA input ] | [ sec struct ] | (((...[[[[....)))......]]]]....... |
| DotKnot | [ FASTA input ] | [ sec struct ] | (((...[[[[....)))......]]]]....... |
| Fold | [ FASTA input ] | [ sec struct ] | (((...((((.((......))..))))....))) |
| HotKnots | [ FASTA input ] | [ sec struct ] | (((..(((((.((......))..)))).)..))) |
| IPknot | [ FASTA input ] | [ sec struct ] | ((((..((((.((......))..)))).))..)) |
| MCFold (ext) | [ FASTA input ] | [ sec struct ] | (((((((....)))))))((((((....)))))) |
| MaxExpect | [ FASTA input ] | [ sec struct ] | (((...((((.((......))..))))....))) |
| McQFold | [ FASTA input ] | [ sec struct ] | (((...((((.............))))....))) |
| Pknots | [ FASTA input ] | [ sec struct ] | (((...........))).((...........)). |
| PknotsRG | [ FASTA input ] | [ sec struct ] | (((...((((.((......))..))))....))) |
| ProbKnot | [ FASTA input ] | [ sec struct ] | (((...((((.............))))....))) |
| RDfolder | [ FASTA input ] | [ sec struct ] | (((...........)))................. |
| RNASLOpt | [ FASTA input ] | [ sec struct ] | ......((((.............))))....... |
| RNAfold | [ FASTA input ] | [ sec struct ] | ((((..((((.((......))..))))..).))) |
| RNAshapes | [ FASTA input ] | [ sec struct ] | (((...((((.((......))..))))....))) |
| RNAsubopt | [ FASTA input ] | [ sec struct ] | ((((..((((.((......))..))))..).))) |
| RNAwolf (ext) | [ FASTA input ] | [ sec struct ] | .(..).((((.(..(......)))))).((..)) |
| Sfold | [ FASTA input ] | [ sec struct ] | ((((..((((.((......))..))))..).))) |
| UNAFold | [ FASTA input ] | [ sec struct ] | (((...((((.((......))..))))....))) |
| Vsfold4 | [ FASTA input ] | [ sec struct ] | ......((((.............))))....... |
| Vsfold5 | [ FASTA input ] | [ sec struct ] | ......((((.............))))....... |