RNA Secondary Structure Atlas - RNASTRAND - RFA_00643

RNA: RFA_00643
Rfam family: Vimentin3

			AAAAAAAGUGAAAAAAUAACAGCUUUAAAGUGCCUUUCUGCAGUUAUCUGAGAGCGCCAGAUAGAGU
Reference structure (ext)		[ sec struct ]	....(((((((((..........)))...((((.(((.((........)))))))))))))))....
Alterna	[ FASTA input ]	[ sec struct ]	.....................((((((..((((...(((.(((....))))))))))....))))))
CMfinder(seed)	[ FASTA input ]	[ sec struct ]	.....................(((((....(((......)))........)))))............
CRWrnafold	[ FASTA input ]	[ sec struct ]	.....................((((((..((((...(((.(((....))))))))))....))))))
Carnac(seed)	[ FASTA input ]	[ sec struct ]	...................................................................
CentroidAlifold(seed)	[ FASTA input ]	[ sec struct ]	...................................................................
CentroidFold	[ FASTA input ]	[ sec struct ]	............................................((((((.......))))))....
CentroidHomfold‑LAST	[ FASTA input ]	[ sec struct ]	.............................((((..((.((........)).))))))..........
ContextFold	[ FASTA input ]	[ sec struct ]	.....((((............))))....((((.((((...........))))))))..........
Contrafold	[ FASTA input ]	[ sec struct ]	......................((....)).............(((((((.......)))))))...
Cylofold	[ FASTA input ]	[ sec struct ]	....(((((............)))))...((((..........[[[[[[[...))))]]]]]]]...
DAFS(seed)	[ FASTA input ]	[ sec struct ]	...............................((....................))............
DotKnot	[ FASTA input ]	[ sec struct ]	.....................(((((....(((......))).[[[[[[[)))))..]]]]]]]...
Fold	[ FASTA input ]	[ sec struct ]	.......((.........)).((((((..((((...(((.(((....))))))))))....))))))
HotKnots	[ FASTA input ]	[ sec struct ]	....((((({{{{........)))))...((((.}}}}.....[[[[[[[...))))]]]]]]]...
IPknot	[ FASTA input ]	[ sec struct ]	.....((((............))))....(((............[[[[[[....)))]]]]]]....
MCFold (ext)	[ FASTA input ]	[ sec struct ]	......((((((...))))))((((((((.(((((((((.((((..)))))))))))))))))))))
MXScarna(seed)	[ FASTA input ]	[ sec struct ]	.((.((((((...................((((..(.(((........).)))))))))))))))..
Mastr(seed)	[ FASTA input ]	[ sec struct ]	.(((.........................(((......................))))...))....
MaxExpect	[ FASTA input ]	[ sec struct ]	.......((.........)).((((((..((((...(((.(((....))))))))))....))))))
McQFold	[ FASTA input ]	[ sec struct ]	....(((((............)))))....(((......))).(((((((.......)))))))...
Murlet(seed)	[ FASTA input ]	[ sec struct ]	.....................(((((....(((......)))........)))))............
PETfold_2.0(seed)	[ FASTA input ]	[ sec struct ]	.....(((((...........((((.....(((......))).........))))..))))).....
PETfold_pre2.0(seed)	[ FASTA input ]	[ sec struct ]	.....(((((...........((((.....(((......))).........))))..))))).....
Pknots	[ FASTA input ]	[ sec struct ]	....(((((............)))))....(((......))).(((((((.......)))))))...
PknotsRG	[ FASTA input ]	[ sec struct ]	.....................(((((....(((......))).[[[[[[[)))))..]]]]]]]...
ProbKnot	[ FASTA input ]	[ sec struct ]	.....................((((((..((((.(..((.(((....))))))))))....))))))
RDfolder	[ FASTA input ]	[ sec struct ]	............................................((((((.......))))))....
RNASLOpt	[ FASTA input ]	[ sec struct ]	....(((((............))))).................(((((((.......)))))))...
RNASampler(seed)	[ FASTA input ]	[ sec struct ]	.......(((..(((........))).......(((((...........))))))))..........
RNAalifold(seed)	[ FASTA input ]	[ sec struct ]	.....................(((((..(.(((......))).)......)))))............
RNAfold	[ FASTA input ]	[ sec struct ]	.....................((((((..((((...(((.(((....))))))))))....))))))
RNAshapes	[ FASTA input ]	[ sec struct ]	.....................((((((..((((...(((.(((....))))))))))....))))))
RNAsubopt	[ FASTA input ]	[ sec struct ]	.....................((((((..((((...(((.(((....))))))))))....))))))
RNAwolf (ext)	[ FASTA input ]	[ sec struct ]	.(((((((((.(......))).)))))))..((((((((((..(........)..).))))))).))
RSpredict(seed)	[ FASTA input ]	[ sec struct ]	.....(..((...........(((((....(((......)))........)))))..))..).....
Sfold	[ FASTA input ]	[ sec struct ]	.....................((((((..((((...(((.(((....))))))))))....))))))
UNAFold	[ FASTA input ]	[ sec struct ]	.....................((((((..((((...(((.(((....))))))))))....))))))
Vsfold4	[ FASTA input ]	[ sec struct ]	....(((((............)))))...((((.((((...........))))))))..........
Vsfold5	[ FASTA input ]	[ sec struct ]	....(((((......[[[[[.)))))...((((.((((....]]]]]..))))))))..........

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