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RNA Secondary Structure Atlas - RNASTRAND - RFA_00644
RNA: RFA_00644
Rfam family:
Vimentin3
| GUUGUGUUUUAAAAUUUGAAGAAAACCAGCUUUCAAGUGCCUUUUGCAGUUAAUUGGAGAGCGCAAGAUAGGGA | |||
| Reference structure (ext) | [ sec struct ] | ....(((((((((.................)))...((((.(((((........)).))))))))))))).... | |
| Afold | [ FASTA input ] | [ sec struct ] | ((((((((((..((((....((((......))))...(((.....)))...))))..))))))))).......) |
| Alterna | [ FASTA input ] | [ sec struct ] | .(((((((((((...))))))....((((((.......((.....)))))....)))....)))))........ |
| CMfinder(seed) | [ FASTA input ] | [ sec struct ] | ............................(((((....(((.....))).........)))))............ |
| CRWrnafold | [ FASTA input ] | [ sec struct ] | ((((.(((((...........)))))))))..((..((((((((...........)))).))))..))...... |
| Carnac(seed) | [ FASTA input ] | [ sec struct ] | .......................................................................... |
| CentroidAlifold(seed) | [ FASTA input ] | [ sec struct ] | .......................................................................... |
| CentroidFold | [ FASTA input ] | [ sec struct ] | .............................................(.................).......... |
| CentroidHomfold‑LAST | [ FASTA input ] | [ sec struct ] | ...............((((((........)).))))(((((((.............))).)))).......... |
| ContextFold | [ FASTA input ] | [ sec struct ] | ....((((((.....((((((.........))))))((((.(((((........)).))))))))))))).... |
| Contrafold | [ FASTA input ] | [ sec struct ] | .................((.............))........(((((.((..........)))))))....... |
| Cylofold | [ FASTA input ] | [ sec struct ] | .(((((((((...((((((((.........))))))))...................)))))))))........ |
| DAFS(seed) | [ FASTA input ] | [ sec struct ] | ......................................((....................))............ |
| DotKnot | [ FASTA input ] | [ sec struct ] | (((...((((((...))))))..)))..((((((.....[[[[.............)))))).......]]]]. |
| Fold | [ FASTA input ] | [ sec struct ] | ((((.(((((...........))))))))).........((((((((.(((........))))))))..))).. |
| HotKnots | [ FASTA input ] | [ sec struct ] | .(((((((((...((((((((....[[[[.)))))))).{{{{..........]]]])))))))))...}}}}. |
| IPknot | [ FASTA input ] | [ sec struct ] | ..((.(((........[[.....))))).....]].((((....................)))).......... |
| MCFold (ext) | [ FASTA input ] | [ sec struct ] | ((((((((((((..))))))))))))((.(((((.(.(((((((((((((..))))))))))))))))))))). |
| MXScarna(seed) | [ FASTA input ] | [ sec struct ] | .((.((((((..........................((((..((((.........))).))))))))))))).. |
| Mastr(seed) | [ FASTA input ] | [ sec struct ] | ....((((((............................(......................)..)))))).... |
| MaxExpect | [ FASTA input ] | [ sec struct ] | ..((((((((...............................................))))))))......... |
| McQFold | [ FASTA input ] | [ sec struct ] | .(((((((((...((((((((.........))))))))...................)))))))))........ |
| Murlet(seed) | [ FASTA input ] | [ sec struct ] | ....((((((..................(((....)))((.....)).................)))))).... |
| PETfold_2.0(seed) | [ FASTA input ] | [ sec struct ] | .....(((((..................((((.....(((.....)))..........))))..)))))..... |
| PETfold_pre2.0(seed) | [ FASTA input ] | [ sec struct ] | .....(((((..................((((.....(((.....)))..........))))..)))))..... |
| Pknots | [ FASTA input ] | [ sec struct ] | .............((((((((.........)))))))).((((((((.(((........))))))))..))).. |
| PknotsRG | [ FASTA input ] | [ sec struct ] | .....(((((...[[[[[[[[)))))....]]]]]]]].((((((((.(((........))))))))..))).. |
| ProbKnot | [ FASTA input ] | [ sec struct ] | ..((((((((..((((((((...........)))))................)))..))))))))......... |
| RDfolder | [ FASTA input ] | [ sec struct ] | .............(((((((...........))))))).................................... |
| RNASLOpt | [ FASTA input ] | [ sec struct ] | .(((((((((..((((...........((((..((((.....)))).))))))))..)))))))))........ |
| RNASampler(seed) | [ FASTA input ] | [ sec struct ] | ....((((((..........((((......))))..............................)))))).... |
| RNAalifold(seed) | [ FASTA input ] | [ sec struct ] | ....((((((..................((........)).....((.............))..)))))).... |
| RNAfold | [ FASTA input ] | [ sec struct ] | .(((((((((..((((....((((......))))...(((.....)))...))))..)))))))))........ |
| RNAshapes | [ FASTA input ] | [ sec struct ] | .(((((((((..((((....((((......))))...(((.....)))...))))..)))))))))........ |
| RNAsubopt | [ FASTA input ] | [ sec struct ] | .(((((((((..((((....((((......))))((.(((.....))).))))))..)))))))))........ |
| RNAwolf (ext) | [ FASTA input ] | [ sec struct ] | .((((((((((((((......)))))))((((..))))..((...............)))))))))(......) |
| RSpredict(seed) | [ FASTA input ] | [ sec struct ] | ....((((((..................((((((...(((.....)))........))))))..)))))).... |
| Sfold | [ FASTA input ] | [ sec struct ] | .(((((((((..(.........................((.....)).......)..)))))))))........ |
| UNAFold | [ FASTA input ] | [ sec struct ] | .(((((((((..((((....((((......))))...(((.....)))...))))..)))))))))........ |
| Vsfold4 | [ FASTA input ] | [ sec struct ] | ..(((...(((.....))).((((......))))..((((((((...........)))).))))...))).... |
| Vsfold5 | [ FASTA input ] | [ sec struct ] | ..(((...(((.....))).((((......))))..((((((((...........)))).))))...))).... |