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RNA Secondary Structure Atlas - RNASTRAND - RFA_00645
RNA: RFA_00645
Rfam family:
Vimentin3
| AAAGAAAAGAAAAGAAAAACAGCUUUAAAGUGCCUUCUUUGCAUUGCCACAUUAGAGCGGUCUGUUAUUA | |||
| Reference structure (ext) | [ sec struct ] | ....(((((((((..........)))...((((.((.(.((........))..))))))))))))).... | |
| Afold | [ FASTA input ] | [ sec struct ] | (...........(((......(((((((.(((.(...........).))).)))))))..)))......) |
| Alterna | [ FASTA input ] | [ sec struct ] | ..............((.((((((((((((((((.......)))))......))))))....))))).)). |
| CMfinder(seed) | [ FASTA input ] | [ sec struct ] | ..............................(((..((.(..............))))))........... |
| CRWrnafold | [ FASTA input ] | [ sec struct ] | .................(((((((((((.(((...............))).)))))))....)))).... |
| Carnac(seed) | [ FASTA input ] | [ sec struct ] | ...................................................................... |
| CentroidAlifold(seed) | [ FASTA input ] | [ sec struct ] | .......(......................................................)....... |
| CentroidFold | [ FASTA input ] | [ sec struct ] | ...................(.(((((((.(((...............))).))))))).).......... |
| CentroidHomfold‑LAST | [ FASTA input ] | [ sec struct ] | .....................(((((((.(((...............))).)))))))............ |
| ContextFold | [ FASTA input ] | [ sec struct ] | ........((...(.......(((((((.(((...............))).)))))))....)....)). |
| Contrafold | [ FASTA input ] | [ sec struct ] | ..................((.(((((((.(((.(...........).))).))))))).))......... |
| Cylofold | [ FASTA input ] | [ sec struct ] | ..........((((((.....[[[[[[[[[[[[.))))))]]]]]......]]]]]]]............ |
| DAFS(seed) | [ FASTA input ] | [ sec struct ] | ...............................((.......................))............ |
| DotKnot | [ FASTA input ] | [ sec struct ] | ..........((((((.....[[[[[[[.[[[..)))))).......]]].]]]]]]]............ |
| Fold | [ FASTA input ] | [ sec struct ] | ..................((.(((((((.((((............).))).))))))).))......... |
| HotKnots | [ FASTA input ] | [ sec struct ] | ..........((((((.....[[[[[[[[[[[[.))))))]]]]](((...]]]]]]])))......... |
| IPknot | [ FASTA input ] | [ sec struct ] | .....................(((((((.(((...............))).)))))))............ |
| MCFold (ext) | [ FASTA input ] | [ sec struct ] | .....((((((((((....((((((((((((((((((...)..))))))))))))))))))))))))))) |
| MXScarna(seed) | [ FASTA input ] | [ sec struct ] | ..(......((((((..............((((..((.(((........)..)))))))))))))).).. |
| Mastr(seed) | [ FASTA input ] | [ sec struct ] | ....((((((..................................................)))))).... |
| MaxExpect | [ FASTA input ] | [ sec struct ] | .....................(((((((.((((............).))).)))))))............ |
| McQFold | [ FASTA input ] | [ sec struct ] | .....................((((((((((((.......)))))......)))))))............ |
| Murlet(seed) | [ FASTA input ] | [ sec struct ] | .....................(((((....(((.......)))..........)))))............ |
| PETfold_2.0(seed) | [ FASTA input ] | [ sec struct ] | .....(((((...........((((.....(((.......)))...........))))..)))))..... |
| PETfold_pre2.0(seed) | [ FASTA input ] | [ sec struct ] | .....(((((...........((((.....(((.......)))...........))))..)))))..... |
| Pknots | [ FASTA input ] | [ sec struct ] | ..........((((...[[[[[))))..(((((.......)))))((.........))...]]]]].... |
| PknotsRG | [ FASTA input ] | [ sec struct ] | ..........((((...[[[[[))))..(((((.......)))))................]]]]].... |
| ProbKnot | [ FASTA input ] | [ sec struct ] | .....................(((((((.((((............).))).)))))))............ |
| RDfolder | [ FASTA input ] | [ sec struct ] | ............................(((((.......)))))......................... |
| RNASLOpt | [ FASTA input ] | [ sec struct ] | .....................((((((((((((.......)))))......)))))))............ |
| RNASampler(seed) | [ FASTA input ] | [ sec struct ] | .....................((((((((((((.......)))))......)))))))............ |
| RNAalifold(seed) | [ FASTA input ] | [ sec struct ] | .....................(((((..(.(((.......))).)........)))))............ |
| RNAfold | [ FASTA input ] | [ sec struct ] | ............(((......(((((((.(((.(...........).))).)))))))..)))....... |
| RNAshapes | [ FASTA input ] | [ sec struct ] | ............(((......((((((((((((.......)))))......)))))))..)))....... |
| RNAsubopt | [ FASTA input ] | [ sec struct ] | ............(((......(((((((.(((.(...........).))).)))))))..)))....... |
| RNAwolf (ext) | [ FASTA input ] | [ sec struct ] | (((......)))..((.(((((((((((.(((...............))).)))..).)).))))).)). |
| RSpredict(seed) | [ FASTA input ] | [ sec struct ] | ....((.(((...........((((((...(((.......))).........))))))..))).)).... |
| Sfold | [ FASTA input ] | [ sec struct ] | .....................(((((((.(((.(...........).))).)))))))............ |
| UNAFold | [ FASTA input ] | [ sec struct ] | ............(((......(((((((.(((...............))).)))))))..)))....... |
| Vsfold4 | [ FASTA input ] | [ sec struct ] | .................(((((........(((.......))).(((.........)))..))))).... |
| Vsfold5 | [ FASTA input ] | [ sec struct ] | .....((((((.......[[[[........[[..)))))).]].(((.........)))..]]]]..... |