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RNA Secondary Structure Atlas - RNASTRAND - RFA_00649
RNA: RFA_00649
Rfam family:
Vimentin3
| UUCGUAUCUUAAGGAAACAGCUUUCAAGUGCCUUUACUGCAGUUUUUCAGGAGCGCAAGAUAGAUU | |||
| Reference structure (ext) | [ sec struct ] | ....(((((((((........)))...((((.(((..((........))))))))))))))).... | |
| Afold | [ FASTA input ] | [ sec struct ] | (((.(((((....((((....))))..((((.....(((........)))..)))).))))))).) |
| Alterna | [ FASTA input ] | [ sec struct ] | ....((((((((((.....(((....))).))))....((.(((((...))))))))))))).... |
| CMfinder(seed) | [ FASTA input ] | [ sec struct ] | ...........................((((..((.(............))))))).......... |
| CRWrnafold | [ FASTA input ] | [ sec struct ] | ....((((((...((((....))))..(((((((..............))).)))))))))).... |
| Carnac(seed) | [ FASTA input ] | [ sec struct ] | .................................................................. |
| CentroidAlifold(seed) | [ FASTA input ] | [ sec struct ] | .................................................................. |
| CentroidFold | [ FASTA input ] | [ sec struct ] | ..............((((.((.................)).))))..................... |
| CentroidHomfold‑LAST | [ FASTA input ] | [ sec struct ] | ....(((((..................((((.....(((........)))..)))).))))).... |
| ContextFold | [ FASTA input ] | [ sec struct ] | ....((((((..(....).........((((.(((..((........))))))))))))))).... |
| Contrafold | [ FASTA input ] | [ sec struct ] | .....((((...((((((.((......(........).)).))))))..........))))..... |
| Cylofold | [ FASTA input ] | [ sec struct ] | ..........((((.....[[[[.......))))................]]]]............ |
| DAFS(seed) | [ FASTA input ] | [ sec struct ] | .............................((.....................))............ |
| DotKnot | [ FASTA input ] | [ sec struct ] | ..........(((((((....))))..[[[[)))..(((........)))..]]]].......... |
| Fold | [ FASTA input ] | [ sec struct ] | .((.(((((....((((....))))..((((.((..(((........))))))))).))))))).. |
| HotKnots | [ FASTA input ] | [ sec struct ] | .((.((((((..(....).(((((.((.(((.......))).)).....)))))..)))))))).. |
| IPknot | [ FASTA input ] | [ sec struct ] | ....(((((................................................))))).... |
| MCFold (ext) | [ FASTA input ] | [ sec struct ] | (((.((((((.(((((((.(((((..))))))))))))((.(((((...)))))))))))))))). |
| MXScarna(seed) | [ FASTA input ] | [ sec struct ] | .((.((((((.................((((..((.(((........))))))))))))))))).. |
| Mastr(seed) | [ FASTA input ] | [ sec struct ] | ....((((((..................((.......................)).)))))).... |
| MaxExpect | [ FASTA input ] | [ sec struct ] | .((.(((((....(..........)..((((.((..(((........))))))))).))))))).. |
| McQFold | [ FASTA input ] | [ sec struct ] | ....((((((.................((((.....(((........)))..)))))))))).... |
| Murlet(seed) | [ FASTA input ] | [ sec struct ] | ...................(((((....(((.......)))........)))))............ |
| PETfold_2.0(seed) | [ FASTA input ] | [ sec struct ] | .....(((((.........((((.....(((.......))).........))))..)))))..... |
| PETfold_pre2.0(seed) | [ FASTA input ] | [ sec struct ] | .....(((((.........((((.....(((.......))).........))))..)))))..... |
| Pknots | [ FASTA input ] | [ sec struct ] | ....((((((((((......))))..((((....))))((.((((.....)))))))))))).... |
| PknotsRG | [ FASTA input ] | [ sec struct ] | .((.((((..((((.....(((....))).))))...(((.((((.....))))))).)))))).. |
| ProbKnot | [ FASTA input ] | [ sec struct ] | .((.((((((...((((....))))..((((.((..(((.(.....)))))))))))))))))).. |
| RDfolder | [ FASTA input ] | [ sec struct ] | ...........................((((.....(((........)))..)))).......... |
| RNASLOpt | [ FASTA input ] | [ sec struct ] | ....((((((...((((.((((....((((....))))..))))))))........)))))).... |
| RNASampler(seed) | [ FASTA input ] | [ sec struct ] | ....((((((...((((....))))...............................)))))).... |
| RNAalifold(seed) | [ FASTA input ] | [ sec struct ] | ....((((((.........((........)).......((............))..)))))).... |
| RNAfold | [ FASTA input ] | [ sec struct ] | .((.((((((..(....).(((((.((.(((.......))).)).....)))))..)))))))).. |
| RNAshapes | [ FASTA input ] | [ sec struct ] | .((.((((..((((.....(((....))).))))...(((.((((.....))))))).)))))).. |
| RNAsubopt | [ FASTA input ] | [ sec struct ] | .((.((((((..(....).........((((.....(((........)))..)))))))))))).. |
| RNAwolf (ext) | [ FASTA input ] | [ sec struct ] | .((.((((((((..(((..((((..))))..)))(((((........)))))..)))))))))).. |
| RSpredict(seed) | [ FASTA input ] | [ sec struct ] | ....((((((.........(((((....(((.......)))........)))))..)))))).... |
| Sfold | [ FASTA input ] | [ sec struct ] | .((.((((((..(....).((((.....(((.......))).........))))..)))))))).. |
| UNAFold | [ FASTA input ] | [ sec struct ] | .((.((((((...((((....))))..((((.....(((........)))..)))))))))))).. |
| Vsfold4 | [ FASTA input ] | [ sec struct ] | ......(((....((((....)))).((((....))))...((((.....)))).......))).. |
| Vsfold5 | [ FASTA input ] | [ sec struct ] | ......(((....((((....)))).((((....))))...((((.....)))).......))).. |