 | ||||||||||||||
| ||||||||||||||
 | ||||||||||||||
RNA Secondary Structure Atlas - RNASTRAND - RFA_00651
RNA: RFA_00651
Rfam family:
Vimentin3
| UCCAUAUCUUAAAGAAACAGCUUUCAAGUGCCUUUCUGCAGUUUUUCAGGAGCGCAAGGAAUUAA | |||
| Reference structure (ext) | [ sec struct ] | ....(((((((((........)))...((((.(((.((........))))))))))))))).... | |
| Alterna | [ FASTA input ] | [ sec struct ] | (((..........((((....))))..((((..(((((........)))))))))..)))..... |
| CMfinder(seed) | [ FASTA input ] | [ sec struct ] | ...........................((((..(((............))))))).......... |
| CRWrnafold | [ FASTA input ] | [ sec struct ] | (((..........((((....))))..((((..(((((........)))))))))..)))..... |
| Carnac(seed) | [ FASTA input ] | [ sec struct ] | ................................................................. |
| CentroidAlifold(seed) | [ FASTA input ] | [ sec struct ] | ................................................................. |
| CentroidFold | [ FASTA input ] | [ sec struct ] | .................................(((((........))))).............. |
| CentroidHomfold‑LAST | [ FASTA input ] | [ sec struct ] | ....(.((((.(((......)))....((((..(((((........))))))))))))).).... |
| ContextFold | [ FASTA input ] | [ sec struct ] | (((.....(.........)........((((.(((.((........)))))))))..)))..... |
| Contrafold | [ FASTA input ] | [ sec struct ] | .............(((......)))..((((..(((((........))))))))).......... |
| Cylofold | [ FASTA input ] | [ sec struct ] | ............((((((.........[[[..[[[[[[..))))))]]]]]]]]].......... |
| DAFS(seed) | [ FASTA input ] | [ sec struct ] | .............................((....................))............ |
| DotKnot | [ FASTA input ] | [ sec struct ] | .............((((....))))...(((.[[[[[)))((((.....))))...]]]]].... |
| Fold | [ FASTA input ] | [ sec struct ] | (((....(((((((......)))).))).((.((((((........)))))).))..)))..... |
| HotKnots | [ FASTA input ] | [ sec struct ] | (((..........((((....))))..((((..(((((........)))))))))..)))..... |
| IPknot | [ FASTA input ] | [ sec struct ] | ...........(((......)))......((..(((((........)))))..)).......... |
| MCFold (ext) | [ FASTA input ] | [ sec struct ] | (((((.(((((((((....))))).))))((((((((((((..)))))))))))))))))..... |
| MXScarna(seed) | [ FASTA input ] | [ sec struct ] | .((.((((((.................((((..(((((........))))))))))))))))).. |
| Mastr(seed) | [ FASTA input ] | [ sec struct ] | ....((((((..................((......................)).)))))).... |
| MaxExpect | [ FASTA input ] | [ sec struct ] | (((........(((......)))......((.((((((........)))))).))..)))..... |
| McQFold | [ FASTA input ] | [ sec struct ] | (((........................((((..(((((........)))))))))..)))..... |
| Murlet(seed) | [ FASTA input ] | [ sec struct ] | ....((((((.........(((....)))((......))................)))))).... |
| PETfold_2.0(seed) | [ FASTA input ] | [ sec struct ] | .....(((((.........((((.....(((......))).........))))..)))))..... |
| PETfold_pre2.0(seed) | [ FASTA input ] | [ sec struct ] | .....(((((.........((((.....(((......))).........))))..)))))..... |
| Pknots | [ FASTA input ] | [ sec struct ] | ......((((((((......))))...((((..(((((........))))))))).))))..... |
| PknotsRG | [ FASTA input ] | [ sec struct ] | (((..........((((....))))..((((..(((((........)))))))))..)))..... |
| ProbKnot | [ FASTA input ] | [ sec struct ] | (((........(((......))).....(((.((((((.(.....))))))).))).)))..... |
| RDfolder | [ FASTA input ] | [ sec struct ] | .....................((((..((((..(((((........)))))))))..)))).... |
| RNASLOpt | [ FASTA input ] | [ sec struct ] | ......((((...((((....))))..((((....................)))).))))..... |
| RNASampler(seed) | [ FASTA input ] | [ sec struct ] | ......((((...((((....))))..............................))))...... |
| RNAalifold(seed) | [ FASTA input ] | [ sec struct ] | ...................(((((..(.(((......))).)......)))))............ |
| RNAfold | [ FASTA input ] | [ sec struct ] | (((..........((((....))))..((((..(((((........)))))))))..)))..... |
| RNAshapes | [ FASTA input ] | [ sec struct ] | (((..........((((....))))..((((..(((((........)))))))))..)))..... |
| RNAsubopt | [ FASTA input ] | [ sec struct ] | (((..........((((....))))..((((..(((((........)))))))))..)))..... |
| RNAwolf (ext) | [ FASTA input ] | [ sec struct ] | (((.(((((.((((.....((((..))))..))))(((........))).)).))).)))..... |
| RSpredict(seed) | [ FASTA input ] | [ sec struct ] | ....(.((((.........(((((....(((......)))........)))))..)))).).... |
| Sfold | [ FASTA input ] | [ sec struct ] | (((..........(((......)))........(((((........)))))......)))..... |
| UNAFold | [ FASTA input ] | [ sec struct ] | (((..........((((....))))..((((..(((((........)))))))))..)))..... |
| Vsfold4 | [ FASTA input ] | [ sec struct ] | ......(((....((((....))))..(((.(((.(((........)))))))))..)))..... |
| Vsfold5 | [ FASTA input ] | [ sec struct ] | ......(((....((((....))))..((((.((.(((........)))))))))..)))..... |