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RNA Secondary Structure Atlas - RNASTRAND - RFA_00653
RNA: RFA_00653
Rfam family:
Vimentin3
| GUAAAAUAGAAAAACAGCUUUAAAGUGCCUUUUUUUGCAUUGCCACAUUAGAGCGGUCUGUUGAUA | |||
| Reference structure (ext) | [ sec struct ] | ....(((((((((.....)))...((((.(((...((........))..))))))))))))).... | |
| Afold | [ FASTA input ] | [ sec struct ] | (...((((((......(((((((.(((.(............).))).)))))))..))))))...) |
| Alterna | [ FASTA input ] | [ sec struct ] | ((..((((((......(((((((.(((.........((...))))).)))))))..)))))).)). |
| CMfinder(seed) | [ FASTA input ] | [ sec struct ] | ................(((((....(((........)))..........)))))............ |
| CRWrnafold | [ FASTA input ] | [ sec struct ] | ....((((((......(((((((.(((................))).)))))))..)))))).... |
| Carnac(seed) | [ FASTA input ] | [ sec struct ] | .................................................................. |
| CentroidAlifold(seed) | [ FASTA input ] | [ sec struct ] | ......((..................................................))...... |
| CentroidFold | [ FASTA input ] | [ sec struct ] | ..............(.(((((((.(((................))).))))))).).......... |
| CentroidHomfold‑LAST | [ FASTA input ] | [ sec struct ] | .....(((((......(((((((.(((.(............).))).)))))))..)))))..... |
| ContextFold | [ FASTA input ] | [ sec struct ] | ....((((........(((((((.(((................))).)))))))....)))).... |
| Contrafold | [ FASTA input ] | [ sec struct ] | .............((.(((((((.(((................))).))))))).))......... |
| Cylofold | [ FASTA input ] | [ sec struct ] | ................((((((((((((........)))))......))))))).(((....))). |
| DAFS(seed) | [ FASTA input ] | [ sec struct ] | ..........................((........................))............ |
| DotKnot | [ FASTA input ] | [ sec struct ] | ((((((..........[[[[[[[.[[[.....)))))).....]]].]]]]]]].(((....))). |
| Fold | [ FASTA input ] | [ sec struct ] | ....((((((......(((((((.((((.............).))).)))))))..)))))).... |
| HotKnots | [ FASTA input ] | [ sec struct ] | ....((((((......(((((((.(((.(............).))).)))))))..)))))).... |
| IPknot | [ FASTA input ] | [ sec struct ] | ....((((((......(((((((.(((................))).)))))))..)))))).... |
| MCFold (ext) | [ FASTA input ] | [ sec struct ] | ....((((((((((((((((((((((((((((((..)))))))))))))))))))))))))))))) |
| MXScarna(seed) | [ FASTA input ] | [ sec struct ] | .((.((((((..............((((..((..(((........)..)))))))))))))))).. |
| Mastr(seed) | [ FASTA input ] | [ sec struct ] | ((.........................................................))..... |
| MaxExpect | [ FASTA input ] | [ sec struct ] | ....((((((......(((((((.((((.............).))).)))))))..)))))).... |
| McQFold | [ FASTA input ] | [ sec struct ] | ....((((((......((((((((((((........)))))......)))))))..)))))).... |
| Murlet(seed) | [ FASTA input ] | [ sec struct ] | ................(((((....(((........)))..........)))))............ |
| PETfold_2.0(seed) | [ FASTA input ] | [ sec struct ] | .....(((((......((((.....(((........)))...........))))..)))))..... |
| PETfold_pre2.0(seed) | [ FASTA input ] | [ sec struct ] | .....(((((......((((.....(((........)))...........))))..)))))..... |
| Pknots | [ FASTA input ] | [ sec struct ] | ....((((((......((((((((((((........)))))......)))))))..)))))).... |
| PknotsRG | [ FASTA input ] | [ sec struct ] | ....((((((......((((((((((((........)))))......)))))))..)))))).... |
| ProbKnot | [ FASTA input ] | [ sec struct ] | ....((((((......(((((((.((((.............).))).)))))))..)))))).... |
| RDfolder | [ FASTA input ] | [ sec struct ] | ....((((((......(((((((.(((................))).)))))))..)))))).... |
| RNASLOpt | [ FASTA input ] | [ sec struct ] | ....((((((......((((((((((((........)))))......)))))))..)))))).... |
| RNASampler(seed) | [ FASTA input ] | [ sec struct ] | ................((((((((((((........)))))......)))))))............ |
| RNAalifold(seed) | [ FASTA input ] | [ sec struct ] | ....((((((......((........)).......(((..............))).)))))).... |
| RNAfold | [ FASTA input ] | [ sec struct ] | ....((((((......(((((((.(((.(............).))).)))))))..)))))).... |
| RNAshapes | [ FASTA input ] | [ sec struct ] | ....((((((......((((((((((((........)))))......)))))))..)))))).... |
| RNAsubopt | [ FASTA input ] | [ sec struct ] | ....((((((......(((((((.(((.(............).))).)))))))..)))))).... |
| RNAwolf (ext) | [ FASTA input ] | [ sec struct ] | ((((.(((((((((..((((..))))...))))))))).)))).((........))(((..))).. |
| RSpredict(seed) | [ FASTA input ] | [ sec struct ] | ....((((((......((((((...(((........))).........))))))..)))))).... |
| Sfold | [ FASTA input ] | [ sec struct ] | ....((((((......(((((((.(((.(............).))).)))))))..)))))).... |
| UNAFold | [ FASTA input ] | [ sec struct ] | ....((((((......((((((((((((........)))))......)))))))..)))))).... |
| Vsfold4 | [ FASTA input ] | [ sec struct ] | ............(((((........(((........))).(((.........)))..))))).... |
| Vsfold5 | [ FASTA input ] | [ sec struct ] | (((...((((........))))...(((........))).))).....((((....))))...... |