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RNA Secondary Structure Atlas - RNASTRAND - RFA_00654
RNA: RFA_00654
Rfam family:
Vimentin3
| UUCAUGUCUUAAAGGAAGAAACAGCUUUCAAGUGCCUUUCUCCAGUUUUUCCAUGAGCGCAAGAUUAUUA | |||
| Reference structure (ext) | [ sec struct ] | ....(((((((((............)))...((((.(((.((.........))))))))))))))).... | |
| Afold | [ FASTA input ] | [ sec struct ] | (....(((((...(((.((((..((........)).))))))).((((......))))..)))))....) |
| Alterna | [ FASTA input ] | [ sec struct ] | ((((((.......(((.((((..(((....)))...)))))))........))))))............. |
| CMfinder(seed) | [ FASTA input ] | [ sec struct ] | ...............................((((..((...............)))))).......... |
| CRWrnafold | [ FASTA input ] | [ sec struct ] | .....(((((...(((.((((..(((....)))...))))))).((((......))))..)))))..... |
| Carnac(seed) | [ FASTA input ] | [ sec struct ] | ...................................................................... |
| CentroidAlifold(seed) | [ FASTA input ] | [ sec struct ] | ...................................................................... |
| CentroidFold | [ FASTA input ] | [ sec struct ] | .(((((.......((..((((..(((....)))...)))).))........))))).............. |
| CentroidHomfold‑LAST | [ FASTA input ] | [ sec struct ] | ......((.......................((((.....(...........)...))))..))...... |
| ContextFold | [ FASTA input ] | [ sec struct ] | .....(((((...(((((......)))))..((((.((..(...........).)))))))))))..... |
| Contrafold | [ FASTA input ] | [ sec struct ] | .(((((.......(((.((((..(((....)))...)))))))........))))).............. |
| Cylofold | [ FASTA input ] | [ sec struct ] | .(((((.......(((((......)))))..[[[[................)))))]]]].......... |
| DAFS(seed) | [ FASTA input ] | [ sec struct ] | .................................((.....................))............ |
| DotKnot | [ FASTA input ] | [ sec struct ] | .............(((((((...........[[[[..........)))))))....]]]].......... |
| Fold | [ FASTA input ] | [ sec struct ] | ((((((.......(((.((((..((........)).)))))))........))))))............. |
| HotKnots | [ FASTA input ] | [ sec struct ] | .....(((((...(((.((((..((........)).))))))).((((......))))..)))))..... |
| IPknot | [ FASTA input ] | [ sec struct ] | ((((((.......((.(((((..((........)).)))))))........))))))............. |
| MCFold (ext) | [ FASTA input ] | [ sec struct ] | .(((((((((((((((((((((.(((((..))))))))))))))))))))))))))(((..)))...... |
| MXScarna(seed) | [ FASTA input ] | [ sec struct ] | .((.((((((.....................((((..(((((.........))))))))))))))))).. |
| Mastr(seed) | [ FASTA input ] | [ sec struct ] | ....((((((.......................(.......................)..)))))).... |
| MaxExpect | [ FASTA input ] | [ sec struct ] | .(((((.......((.(((((..((........)).)))))))........))))).............. |
| McQFold | [ FASTA input ] | [ sec struct ] | ((((((......((((((.................))))))..........))))))............. |
| Multilign(seed) | [ FASTA input ] | [ sec struct ] | ...............................................(......)............... |
| Murlet(seed) | [ FASTA input ] | [ sec struct ] | ....((((((.............(((....)))((.....................))..)))))).... |
| PETfold_2.0(seed) | [ FASTA input ] | [ sec struct ] | .....(((((.............((((.....(((......)))..........))))..)))))..... |
| PETfold_pre2.0(seed) | [ FASTA input ] | [ sec struct ] | .....(((((.............((((.....(((......)))..........))))..)))))..... |
| PPfold(seed) | [ FASTA input ] | [ sec struct ] | .......(((.............(((...(((...))).................)))..)))....... |
| Pknots | [ FASTA input ] | [ sec struct ] | (((((((((....))).((((.((((.................))))))))))))))(....)....... |
| PknotsRG | [ FASTA input ] | [ sec struct ] | ((((((.......((.(((((..((........)).)))))))......[[)))))).....]]...... |
| ProbKnot | [ FASTA input ] | [ sec struct ] | .((((([[[[...((.(((((...............)))))))........)))))....]]]]...... |
| RDfolder | [ FASTA input ] | [ sec struct ] | .(((((......((((((.................))))))..........))))).............. |
| RNASLOpt | [ FASTA input ] | [ sec struct ] | .....(((((...(((((......)))))..((((.....................)))))))))..... |
| RNASampler(seed) | [ FASTA input ] | [ sec struct ] | .....(((((.......((((....))))...............................)))))..... |
| RNAalifold(seed) | [ FASTA input ] | [ sec struct ] | ....((((((.............(((....)))((((................)).))..)))))).... |
| RNAfold | [ FASTA input ] | [ sec struct ] | .....(((((...(((.((((..((........)).))))))).((((......))))..)))))..... |
| RNAshapes | [ FASTA input ] | [ sec struct ] | .....(((((...(((.((((..((........)).))))))).((((......))))..)))))..... |
| RNAsubopt | [ FASTA input ] | [ sec struct ] | .....(((((...((.(((((..((........)).))))))).((((......))))..)))))..... |
| RNAwolf (ext) | [ FASTA input ] | [ sec struct ] | .((.(((((.(((((..((((..((((..))))...)))).....))))).(..))).))).))...... |
| RSpredict(seed) | [ FASTA input ] | [ sec struct ] | .....(((((.............((((.....((........))..........))))..)))))..... |
| Sfold | [ FASTA input ] | [ sec struct ] | .(((((.......((.(((((..((......))...)))))))........))))).............. |
| TurboFold(seed) | [ FASTA input ] | [ sec struct ] | .............(((((......)))))..((((.((................)))))).......... |
| UNAFold | [ FASTA input ] | [ sec struct ] | .....(((((...(((.((((..((........)).))))))).((((......))))..)))))..... |
| Vsfold4 | [ FASTA input ] | [ sec struct ] | .....((((....(((((......)))))..((((.....................)))).))))..... |
| Vsfold5 | [ FASTA input ] | [ sec struct ] | .....((((....(((((......)))))..((((.....................)))).))))..... |