RNA Secondary Structure Atlas - RNASTRAND - RFA_00716

RNA: RFA_00716
Rfam family: Hammerhead_1

			ACUCCGUGACAAGUCUCGAAUAGGACGAAAUGUGCGUCCUAGAU
Reference structure (ext)		[ sec struct ]	((((((......((((......))))...(((()))).))))))
Afold	[ FASTA input ]	[ sec struct ]	((..((.((....)).))..(((((((.......)))))))).)
Alterna	[ FASTA input ]	[ sec struct ]	............((((.....((((((.......))))))))))
CMfinder(seed)	[ FASTA input ]	[ sec struct ]	.......(((..((((......)))).........)))......
CRWrnafold	[ FASTA input ]	[ sec struct ]	....................(((((((.......)))))))...
Carnac(seed)	[ FASTA input ]	[ sec struct ]	............................................
CentroidAlifold(seed)	[ FASTA input ]	[ sec struct ]	((((((................................))))))
CentroidFold	[ FASTA input ]	[ sec struct ]	....................(((((((.......)))))))...
CentroidHomfold‑LAST	[ FASTA input ]	[ sec struct ]	....................(((((((.......)))))))...
ContextFold	[ FASTA input ]	[ sec struct ]	.((........))........((((((.......))))))....
Contrafold	[ FASTA input ]	[ sec struct ]	.....(.(......).)...(((((((.......)))))))...
Cylofold	[ FASTA input ]	[ sec struct ]	....................(((((((.......)))))))...
DAFS(seed)	[ FASTA input ]	[ sec struct ]	(((((..(.............................))).)))
DotKnot	[ FASTA input ]	[ sec struct ]	....................(((((((.......)))))))...
Fold	[ FASTA input ]	[ sec struct ]	..((.(.((....)).))).(((((((.......)))))))...
HotKnots	[ FASTA input ]	[ sec struct ]	....((.((....)).))..(((((((.......)))))))...
IPknot	[ FASTA input ]	[ sec struct ]	....................(((((((.......)))))))...
MCFold (ext)	[ FASTA input ]	[ sec struct ]	(.((((((((..))))))..(((((((((...))))))))))))
MXScarna(seed)	[ FASTA input ]	[ sec struct ]	.((((..((((.((((......))))........)))))).)).
Mastr(seed)	[ FASTA input ]	[ sec struct ]	........((..((..........)).........)).......
MaxExpect	[ FASTA input ]	[ sec struct ]	....((.((....)).))..(((((((.......)))))))...
McQFold	[ FASTA input ]	[ sec struct ]	.......(((..))).....(((((((.......)))))))...
Murlet(seed)	[ FASTA input ]	[ sec struct ]	............................................
NanoFolder	[ FASTA input ]	[ sec struct ]	..(((({(((..))).((..[[[[[[[..)}))]]]]]]]))).
PETfold_2.0(seed)	[ FASTA input ]	[ sec struct ]	..(((..((...((..........))..........)).)))..
PETfold_pre2.0(seed)	[ FASTA input ]	[ sec struct ]	...((..((.(.((..........))....).....)).))...
Pknots	[ FASTA input ]	[ sec struct ]	......(((......)))..(((((((.......)))))))...
PknotsRG	[ FASTA input ]	[ sec struct ]	....((.((....)).))..(((((((.......)))))))...
ProbKnot	[ FASTA input ]	[ sec struct ]	..(.((..........))).(((((((.......)))))))...
RDfolder	[ FASTA input ]	[ sec struct ]	....................(((((((.......)))))))...
RNASLOpt	[ FASTA input ]	[ sec struct ]	....................(((((((.......)))))))...
RNASampler(seed)	[ FASTA input ]	[ sec struct ]	....(((..........................)))........
RNAalifold(seed)	[ FASTA input ]	[ sec struct ]	............................................
RNAfold	[ FASTA input ]	[ sec struct ]	....((.((....)).))..(((((((.......)))))))...
RNAshapes	[ FASTA input ]	[ sec struct ]	....((.((....)).))..(((((((.......)))))))...
RNAsubopt	[ FASTA input ]	[ sec struct ]	....((.((....)).))..(((((((.......)))))))...
RNAwolf (ext)	[ FASTA input ]	[ sec struct ]	.(..((((((..))))))..((((((.(......))))))).).
RSpredict(seed)	[ FASTA input ]	[ sec struct ]	(.(....(((..((((......)))).........)))...).)
Sfold	[ FASTA input ]	[ sec struct ]	....((.((....)).))..(((((((.......)))))))...
UNAFold	[ FASTA input ]	[ sec struct ]	....((.((....)).))..(((((((.......)))))))...
Vsfold4	[ FASTA input ]	[ sec struct ]	............((((.....((((((.......))))))))))
Vsfold5	[ FASTA input ]	[ sec struct ]	............((((.....((((((.......))))))))))

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