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RNA Secondary Structure Atlas - RNASTRAND - RFA_00721



RNA: RFA_00721
Rfam family: -

GCGCCGCUGAUGAGGUCAGGGAAGACCGAAAGUGUCGACUCUAUGGGGC
Reference structure (ext) [ sec struct ] ((((((.......((((......))))...((((....)))).))))))
Afold [ FASTA input ] [ sec struct ] ((.((.(((((...)))))....((((....).)))........)).))
Alterna [ FASTA input ] [ sec struct ] ..(((..(((((.((((......)))).....))))).........)))
CRWrnafold [ FASTA input ] [ sec struct ] ..(((.(((((...)))))...(((.(((.....)))..)))....)))
CentroidFold [ FASTA input ] [ sec struct ] ....((((.....((((......))))...))))...............
CentroidHomfold‑LAST [ FASTA input ] [ sec struct ] .............((((......))))......................
ContextFold [ FASTA input ] [ sec struct ] ((.(((((.....)))..)).....((...((.(....).))...))))
Contrafold [ FASTA input ] [ sec struct ] .((.((((.....((((......))))...)))).))............
Cylofold [ FASTA input ] [ sec struct ] ..(((........((((......))))...................)))
DotKnot [ FASTA input ] [ sec struct ] ....((((.....((((..[[[.))))...)))).....]]].......
Fold [ FASTA input ] [ sec struct ] .((.((((.....((((......))))...)))).)).(((....))).
HotKnots [ FASTA input ] [ sec struct ] ((.((.(((((...)))))....((((....).)))........)).))
IPknot [ FASTA input ] [ sec struct ] ..(((........((........[[)).......]]..........)))
MCFold (ext) [ FASTA input ] [ sec struct ] ..(((((((((((..)))((((((((((..)).))))))))))))))))
MaxExpect [ FASTA input ] [ sec struct ] .((.((((.....((((......))))...)))).)).(((....))).
McQFold [ FASTA input ] [ sec struct ] ..(((........((((......))))...................)))
Pknots [ FASTA input ] [ sec struct ] ...((.((((.....))))))..((((....).)))..(((....))).
PknotsRG [ FASTA input ] [ sec struct ] .((.((((.....((((......))))...)))).)).(((....))).
ProbKnot [ FASTA input ] [ sec struct ] ....((((.....((((......))))...))))....(((....))).
RDfolder [ FASTA input ] [ sec struct ] ....((((.....((((......))))...))))...............
RNASLOpt [ FASTA input ] [ sec struct ] ....((((.....((((......))))...))))...............
RNAfold [ FASTA input ] [ sec struct ] ((.((.(((((...)))))....((((....).)))........)).))
RNAshapes [ FASTA input ] [ sec struct ] .((.((((.....((((......))))...)))).)).(((....))).
RNAsubopt [ FASTA input ] [ sec struct ] ((.((.(((((...)))))(((.((((....).)))...)))..)).))
RNAwolf (ext) [ FASTA input ] [ sec struct ] ....((((..(.(((((......))))).)))))..(((((...)))))
Sfold [ FASTA input ] [ sec struct ] ((.((..((((...))))(((..((((....).)))..)))...)).))
UNAFold [ FASTA input ] [ sec struct ] .((.((((.....((((......))))...)))).)).(((....))).
Vsfold4 [ FASTA input ] [ sec struct ] ....((((.....((((......))))...))))...............
Vsfold5 [ FASTA input ] [ sec struct ] ....((((.....((((......))))...))))...............