RNA Secondary Structure Atlas - RNASTRAND - RFA_00734

RNA: RFA_00734
Rfam family: s2m

			CAGUGCCGGGGCCACGCGGCGUACGAUCGUGGGUACAGCACUA
Reference structure (ext)		[ sec struct ]	.(((((....(((.((((.....))..))..)))...))))).
Afold	[ FASTA input ]	[ sec struct ]	((((((.(..(((.((((((....).)))))))).).))))))
Alterna	[ FASTA input ]	[ sec struct ]	.(((((..(..........................).))))).
CMfinder(seed)	[ FASTA input ]	[ sec struct ]	.(((((....(((...((.....))......)))...))))).
CMfinder(20)	[ FASTA input ]	[ sec struct ]	.(((((....(((..................)))...))))).
CRWrnafold	[ FASTA input ]	[ sec struct ]	.(((((....(((.(((((.......))))))))...))))).
Carnac(seed)	[ FASTA input ]	[ sec struct ]	.(((((...............................))))).
Carnac(20)	[ FASTA input ]	[ sec struct ]	.(((((...............................))))).
CentroidAlifold(seed)	[ FASTA input ]	[ sec struct ]	((((((.(..(((.((((.....))..))..))).).))))))
CentroidAlifold(20)	[ FASTA input ]	[ sec struct ]	((((((.(..(((.((((.....))..))..))).).))))))
CentroidFold	[ FASTA input ]	[ sec struct ]	.(((((.(..((((((((.....))..))))).).).))))).
CentroidHomfold‑LAST	[ FASTA input ]	[ sec struct ]	.(((((....(((.((((.....))..))..)))...))))).
ContextFold	[ FASTA input ]	[ sec struct ]	.(((((.....(((((((.....))..))))).....))))).
Contrafold	[ FASTA input ]	[ sec struct ]	.(((((.(..((((((((...()))..))))).).).))))).
Cylofold	[ FASTA input ]	[ sec struct ]	...(((((...[[[[[)))))......]]]]]...........
DAFS(seed)	[ FASTA input ]	[ sec struct ]	((((((....(((.((((.....))..))..)))...))))))
DAFS(20)	[ FASTA input ]	[ sec struct ]	((((((....(((.((((.....))..))..)))...))))))
DotKnot	[ FASTA input ]	[ sec struct ]	....((((...[[[[[)))).......]]]]]...........
Fold	[ FASTA input ]	[ sec struct ]	.(((((.....(((((((.....))..))))).....))))).
HotKnots	[ FASTA input ]	[ sec struct ]	.(((((.(..(((.((((((....).)))))))).).))))).
IPknot	[ FASTA input ]	[ sec struct ]	.(((((.....(((((((.....))..))))).....))))).
MCFold (ext)	[ FASTA input ]	[ sec struct ]	.(((((((((((((((.((((..))))))))))))))))))).
MXScarna(seed)	[ FASTA input ]	[ sec struct ]	.(((((.(..(((.((((.....))..))..))).).))))).
MXScarna(20)	[ FASTA input ]	[ sec struct ]	.(((((.(..(((.((((.....))..)..)))).).))))).
Mastr(seed)	[ FASTA input ]	[ sec struct ]	((((((.(..(((...((.....))......))).).))))))
Mastr(20)	[ FASTA input ]	[ sec struct ]	((((((.(..(((...((.....))......))).).))))))
MaxExpect	[ FASTA input ]	[ sec struct ]	.(((((.....(((((((.....))..))))).....))))).
McQFold	[ FASTA input ]	[ sec struct ]	.(((((.....(((((...........))))).....))))).
Multilign(20)	[ FASTA input ]	[ sec struct ]	.(((((.....(((((((.....))..))))).....))))).
Murlet(seed)	[ FASTA input ]	[ sec struct ]	.(((((....(((.((((.....))..))..)))...))))).
Murlet(20)	[ FASTA input ]	[ sec struct ]	.(((((.(.(.((.((((.....))..)).)).).).))))).
PETfold_2.0(seed)	[ FASTA input ]	[ sec struct ]	((((((....(((.((((.....))..))..)))...))))))
PETfold_2.0(20)	[ FASTA input ]	[ sec struct ]	((((((....(((.((((.....))..))..)))...))))))
PETfold_pre2.0(seed)	[ FASTA input ]	[ sec struct ]	((((((....(((.((((.....))..))..)))...))))))
PETfold_pre2.0(20)	[ FASTA input ]	[ sec struct ]	((((((....(((.((((.....))..))..)))...))))))
PPfold(20)	[ FASTA input ]	[ sec struct ]	.(((((.....((.((((.....))..)).)).....))))).
Pknots	[ FASTA input ]	[ sec struct ]	...(((((...[[[[[)))))......]]]]]((.....))..
PknotsRG	[ FASTA input ]	[ sec struct ]	...(((((...[[[[[)))))......]]]]]...........
ProbKnot	[ FASTA input ]	[ sec struct ]	.(((((....((((((...........))))).)...))))).
RDfolder	[ FASTA input ]	[ sec struct ]	.(((((.....(((((...........))))).....))))).
RNASLOpt	[ FASTA input ]	[ sec struct ]	.(((((.....(((((...........))))).....))))).
RNASampler(seed)	[ FASTA input ]	[ sec struct ]	.(((((...............................))))).
RNASampler(20)	[ FASTA input ]	[ sec struct ]	.(((((...............................))))).
RNAalifold(seed)	[ FASTA input ]	[ sec struct ]	.(((((....(((.((((.....))..))..)))...))))).
RNAalifold(20)	[ FASTA input ]	[ sec struct ]	.(((((.(.(.((.((((.....))..)).)).).).))))).
RNAfold	[ FASTA input ]	[ sec struct ]	.(((((.(..(((.((((((....).)))))))).).))))).
RNAshapes	[ FASTA input ]	[ sec struct ]	.(((((....(((.(((((.......))))))))...))))).
RNAsubopt	[ FASTA input ]	[ sec struct ]	.(((((.(..(((.((((((....).)))))))).).))))).
RNAwolf (ext)	[ FASTA input ]	[ sec struct ]	.(((((.(..(((((((........).))))))..)).)))).
RSpredict(seed)	[ FASTA input ]	[ sec struct ]	.(((((....(((...((.....))......)))...))))).
RSpredict(20)	[ FASTA input ]	[ sec struct ]	.(((((....(((...((.....))......)))...))))).
Sfold	[ FASTA input ]	[ sec struct ]	.(((((.(..(((.((((((....).)))))))).).))))).
TurboFold(20)	[ FASTA input ]	[ sec struct ]	.(((((.....(((((((.....))..))))).....))))).
UNAFold	[ FASTA input ]	[ sec struct ]	.(((((....(((.(((((.......))))))))...))))).
Vsfold4	[ FASTA input ]	[ sec struct ]	.(((((((........))).((((........))))..)))).
Vsfold5	[ FASTA input ]	[ sec struct ]	.....(((...[[[[[))).((((...]]]]])))).......

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