RNA Secondary Structure Atlas - RNASTRAND - RFA_00736

RNA: RFA_00736
Rfam family: s2m

			GGAGACCGCGGCCACGCCGAGUAGGAUCGAGGGUACAGUCUCC
Reference structure (ext)		[ sec struct ]	.(((((....(((.((((.....))..))..)))...))))).
Afold	[ FASTA input ]	[ sec struct ]	((((((....(((.(..(((......))).))))...))))))
Alterna	[ FASTA input ]	[ sec struct ]	((((((..((((...)))).(((..........))).))))))
CMfinder(seed)	[ FASTA input ]	[ sec struct ]	.(((((....(((...((.....))......)))...))))).
CMfinder(20)	[ FASTA input ]	[ sec struct ]	.(((((....(((...((.....))......)))...))))).
CRWrnafold	[ FASTA input ]	[ sec struct ]	((((((..((((...)))).(((..........))).))))))
Carnac(seed)	[ FASTA input ]	[ sec struct ]	((((((...............................))))))
Carnac(20)	[ FASTA input ]	[ sec struct ]	((((((...............................))))))
CentroidAlifold(seed)	[ FASTA input ]	[ sec struct ]	((((((.(..(((.((((.....))..))..))).).))))))
CentroidAlifold(20)	[ FASTA input ]	[ sec struct ]	((((((.(..(((.((((.....))..))..))).).))))))
CentroidFold	[ FASTA input ]	[ sec struct ]	((((((.(..(((.((((.....))..)).)).).).))))))
CentroidHomfold‑LAST	[ FASTA input ]	[ sec struct ]	((((((....(((.((((.....))..))..)))...))))))
ContextFold	[ FASTA input ]	[ sec struct ]	((((((....(((.((((.....))..))..)))...))))))
Contrafold	[ FASTA input ]	[ sec struct ]	((((((.(..(((.((((.....))..)).)).).).))))))
Cylofold	[ FASTA input ]	[ sec struct ]	((((((..((((...))))..................))))))
DAFS(seed)	[ FASTA input ]	[ sec struct ]	((((((....(((.((((.....))..))..)))...))))))
DAFS(20)	[ FASTA input ]	[ sec struct ]	((((((....(((.((((.....))..))..)))...))))))
DotKnot	[ FASTA input ]	[ sec struct ]	((((((....(((....(((......)))..)))...))))))
Fold	[ FASTA input ]	[ sec struct ]	((((((....(((.((((.....))..))..)))...))))))
HotKnots	[ FASTA input ]	[ sec struct ]	((((((....(((.(..(((......))).))))...))))))
IPknot	[ FASTA input ]	[ sec struct ]	((((((....(((.((((.....))..))..)))...))))))
MCFold (ext)	[ FASTA input ]	[ sec struct ]	((((((((((((...))))))(.(((((...))))))))))))
MXScarna(seed)	[ FASTA input ]	[ sec struct ]	.(((((.(..(((.((((.....))..))..))).).))))).
MXScarna(20)	[ FASTA input ]	[ sec struct ]	.(((((.(..(((.((((.....))..))..))).).))))).
Mastr(seed)	[ FASTA input ]	[ sec struct ]	((((((.(..(((...((.....))......))).).))))))
Mastr(20)	[ FASTA input ]	[ sec struct ]	((((((.(..(((...((.....))......))).).))))))
MaxExpect	[ FASTA input ]	[ sec struct ]	((((((....(((.((((.....))..))..)))...))))))
McQFold	[ FASTA input ]	[ sec struct ]	((((((..((((...))))..................))))))
Multilign(20)	[ FASTA input ]	[ sec struct ]	((((((....(((....(((......)))..)))...))))))
Murlet(seed)	[ FASTA input ]	[ sec struct ]	.(((((....(((.((((.....))..))..)))...))))).
Murlet(20)	[ FASTA input ]	[ sec struct ]	.(((((....(((.((((.....))..))..)))...))))).
PETfold_2.0(seed)	[ FASTA input ]	[ sec struct ]	((((((....(((.((((.....))..))..)))...))))))
PETfold_2.0(20)	[ FASTA input ]	[ sec struct ]	((((((....(((.((((.....))..))..)))...))))))
PETfold_pre2.0(seed)	[ FASTA input ]	[ sec struct ]	((((((....(((.((((.....))..))..)))...))))))
PETfold_pre2.0(20)	[ FASTA input ]	[ sec struct ]	.(((((....(((.((((.....))..))..)))...))))).
PPfold(20)	[ FASTA input ]	[ sec struct ]	.(((((.....((.((((.....))..)).)).....))))).
Pknots	[ FASTA input ]	[ sec struct ]	((((((.(((....)))(((......))).(....).))))))
PknotsRG	[ FASTA input ]	[ sec struct ]	((((((....(((....(((......)))..)))...))))))
ProbKnot	[ FASTA input ]	[ sec struct ]	((((((....(((..................)))...))))))
RDfolder	[ FASTA input ]	[ sec struct ]	((((((.(((....)))(((......)))........))))))
RNASLOpt	[ FASTA input ]	[ sec struct ]	((((((..((((...))))..................))))))
RNASampler(seed)	[ FASTA input ]	[ sec struct ]	..........(((..................))).........
RNASampler(20)	[ FASTA input ]	[ sec struct ]	..........(((..................))).........
RNAalifold(seed)	[ FASTA input ]	[ sec struct ]	.(((((....(((.((((.....))..))..)))...))))).
RNAalifold(20)	[ FASTA input ]	[ sec struct ]	.(((((....(((.((((.....))..))..)))...))))).
RNAfold	[ FASTA input ]	[ sec struct ]	((((((....(((.(..(((......))).))))...))))))
RNAshapes	[ FASTA input ]	[ sec struct ]	((((((....(((....(((......)))..)))...))))))
RNAsubopt	[ FASTA input ]	[ sec struct ]	((((((....(((.(..(((......))).))))...))))))
RNAwolf (ext)	[ FASTA input ]	[ sec struct ]	((((((((..(((.(..............))))..))))))))
RSpredict(seed)	[ FASTA input ]	[ sec struct ]	((((((....(((...((.....))......)))...))))))
RSpredict(20)	[ FASTA input ]	[ sec struct ]	.(((((....(((...((.....))......)))...))))).
Sfold	[ FASTA input ]	[ sec struct ]	((((((....(((.(..(((......))).))))...))))))
TurboFold(20)	[ FASTA input ]	[ sec struct ]	((((((....(((.((((.....))..))..)))...))))))
UNAFold	[ FASTA input ]	[ sec struct ]	((((((....(((....(((......)))..)))...))))))
Vsfold4	[ FASTA input ]	[ sec struct ]	((((((...............................))))))
Vsfold5	[ FASTA input ]	[ sec struct ]	........(((.....))).........((((......)))).

---