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RNA Secondary Structure Atlas - RNASTRAND - RFA_00745
RNA: RFA_00745
Rfam family:
s2m
| ACUACCCGAGGCCACGCCGAGUUAGGAUCGAGGGUACAGGUAGU | |||
| Reference structure (ext) | [ sec struct ] | .(((((....(((.((((......))..))..)))...))))). | |
| Afold | [ FASTA input ] | [ sec struct ] | ((((((....(((.(..(((.......))).))))...)))))) |
| Alterna | [ FASTA input ] | [ sec struct ] | ((((((((((((...))).........)))........)))))) |
| CMfinder(seed) | [ FASTA input ] | [ sec struct ] | .(((((....(((...((......))......)))...))))). |
| CMfinder(20) | [ FASTA input ] | [ sec struct ] | .(((((....(((...((......))......)))...))))). |
| CRWrnafold | [ FASTA input ] | [ sec struct ] | ((((((....(((....(((.......)))..)))...)))))) |
| Carnac(seed) | [ FASTA input ] | [ sec struct ] | ((((((................................)))))) |
| Carnac(20) | [ FASTA input ] | [ sec struct ] | ((((((................................)))))) |
| CentroidAlifold(seed) | [ FASTA input ] | [ sec struct ] | ((((((.(..(((.((((......))..))..))).).)))))) |
| CentroidAlifold(20) | [ FASTA input ] | [ sec struct ] | ((((((.(..(((.((((......))..))..))).).)))))) |
| CentroidFold | [ FASTA input ] | [ sec struct ] | ((((((.(..(((....(((.......))).).)).).)))))) |
| CentroidHomfold‑LAST | [ FASTA input ] | [ sec struct ] | ((((((....(((.((((......))..))..)))...)))))) |
| ContextFold | [ FASTA input ] | [ sec struct ] | ((((((....(((.((((......))..))..)))...)))))) |
| Contrafold | [ FASTA input ] | [ sec struct ] | ((((((.(..(((.(..(((.......))).)))).).)))))) |
| Cylofold | [ FASTA input ] | [ sec struct ] | ..(((((..(((...))).............)))))........ |
| DAFS(seed) | [ FASTA input ] | [ sec struct ] | ((((((....(((.((((......))..))..)))...)))))) |
| DAFS(20) | [ FASTA input ] | [ sec struct ] | ((((((....(((.((((......))..))..)))...)))))) |
| DotKnot | [ FASTA input ] | [ sec struct ] | ((((((....(((....(((.......)))..)))...)))))) |
| Fold | [ FASTA input ] | [ sec struct ] | ((((((....(((.((((......))..))..)))...)))))) |
| HotKnots | [ FASTA input ] | [ sec struct ] | ((((((....(((.(..(((.......))).))))...)))))) |
| IPknot | [ FASTA input ] | [ sec struct ] | ((((((....(((.((((......))..))..)))...)))))) |
| MCFold (ext) | [ FASTA input ] | [ sec struct ] | ((((((((((((((((((((..))))..)))))))))))))))) |
| MXScarna(seed) | [ FASTA input ] | [ sec struct ] | .(((((.(..(((.((((......))..))..))).).))))). |
| MXScarna(20) | [ FASTA input ] | [ sec struct ] | .(((((.(..(((.((((......))..))..))).).))))). |
| Mastr(seed) | [ FASTA input ] | [ sec struct ] | ((((((.(..(((...((......))......))).).)))))) |
| Mastr(20) | [ FASTA input ] | [ sec struct ] | ((((((.(..(((...((......))......))).).)))))) |
| MaxExpect | [ FASTA input ] | [ sec struct ] | ((((((....(((.((((......))..))..)))...)))))) |
| McQFold | [ FASTA input ] | [ sec struct ] | ((((((((((((...))).........)))........)))))) |
| Multilign(20) | [ FASTA input ] | [ sec struct ] | ((((((....(((....(((.......)))..)))...)))))) |
| Murlet(seed) | [ FASTA input ] | [ sec struct ] | .(((((....(((.((((......))..))..)))...))))). |
| Murlet(20) | [ FASTA input ] | [ sec struct ] | .(((((.(.(.((.((((......))..)).)).).).))))). |
| PETfold_2.0(seed) | [ FASTA input ] | [ sec struct ] | ((((((....(((.((((......))..))..)))...)))))) |
| PETfold_2.0(20) | [ FASTA input ] | [ sec struct ] | ((((((....(((.((((......))..))..)))...)))))) |
| PETfold_pre2.0(seed) | [ FASTA input ] | [ sec struct ] | ((((((....(((.((((......))..))..)))...)))))) |
| PETfold_pre2.0(20) | [ FASTA input ] | [ sec struct ] | ((((((....(((.((((......))..))..)))...)))))) |
| PPfold(20) | [ FASTA input ] | [ sec struct ] | .(((((.....((.((((......))..))..))....))))). |
| Pknots | [ FASTA input ] | [ sec struct ] | ((((((((......)).(((.......))).(....).)))))) |
| PknotsRG | [ FASTA input ] | [ sec struct ] | ((((((....(((.((((......))..))..)))...)))))) |
| ProbKnot | [ FASTA input ] | [ sec struct ] | ((((((....(((...................)))...)))))) |
| RDfolder | [ FASTA input ] | [ sec struct ] | ..(((((..........(((.......))).)))))........ |
| RNASLOpt | [ FASTA input ] | [ sec struct ] | ..(((((........................)))))........ |
| RNASampler(seed) | [ FASTA input ] | [ sec struct ] | ..........(((...................)))......... |
| RNASampler(20) | [ FASTA input ] | [ sec struct ] | ..........(((...................)))......... |
| RNAalifold(seed) | [ FASTA input ] | [ sec struct ] | .(((((....(((.((((......))..))..)))...))))). |
| RNAalifold(20) | [ FASTA input ] | [ sec struct ] | .(((((.(.(.((.((((......))..)).)).).).))))). |
| RNAfold | [ FASTA input ] | [ sec struct ] | ((((((....(((.(..(((.......))).))))...)))))) |
| RNAshapes | [ FASTA input ] | [ sec struct ] | ((((((....(((.((((......))..))..)))...)))))) |
| RNAsubopt | [ FASTA input ] | [ sec struct ] | ((((((....(((.(..(((.......))).))))...)))))) |
| RNAwolf (ext) | [ FASTA input ] | [ sec struct ] | ((((((((.((((.((((........)..))))))))))))))) |
| RSpredict(seed) | [ FASTA input ] | [ sec struct ] | ((((((....(((...((......))......)))...)))))) |
| RSpredict(20) | [ FASTA input ] | [ sec struct ] | ((((((....(((...((......))......)))...)))))) |
| Sfold | [ FASTA input ] | [ sec struct ] | ((((((....(((...((......))......)))...)))))) |
| TurboFold(20) | [ FASTA input ] | [ sec struct ] | ((((((....(((.((((......))..))..)))...)))))) |
| UNAFold | [ FASTA input ] | [ sec struct ] | ((((((....(((.((((......))..))..)))...)))))) |
| Vsfold4 | [ FASTA input ] | [ sec struct ] | ..(((((........................)))))........ |
| Vsfold5 | [ FASTA input ] | [ sec struct ] | ..(((((........................)))))........ |