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RNA Secondary Structure Atlas - RNASTRAND - RFA_00758
RNA: RFA_00758
Rfam family:
s2m
| CAGUGCCAGGGCCACGCGGAGUACGAUCGAGGGUACAGCACCA | |||
| Reference structure (ext) | [ sec struct ] | .(((((....(((.((((.....))..))..)))...))))). | |
| Afold | [ FASTA input ] | [ sec struct ] | (.((((....(((.((((.....))..))..)))...)))).) |
| Alterna | [ FASTA input ] | [ sec struct ] | ..((((..(..........................).)))).. |
| CMfinder(seed) | [ FASTA input ] | [ sec struct ] | ..((((....(((...((.....))......)))...)))).. |
| CMfinder(20) | [ FASTA input ] | [ sec struct ] | ..((((....(((...((.....))......)))...)))).. |
| CRWrnafold | [ FASTA input ] | [ sec struct ] | ..((((....(((...(((.......)))..)))...)))).. |
| Carnac(seed) | [ FASTA input ] | [ sec struct ] | ........................................... |
| Carnac(20) | [ FASTA input ] | [ sec struct ] | ........................................... |
| CentroidAlifold(seed) | [ FASTA input ] | [ sec struct ] | ((((((.(..(((.((((.....))..))..))).).)))))) |
| CentroidAlifold(20) | [ FASTA input ] | [ sec struct ] | ((((((.(..(((.((((.....))..))..))).).)))))) |
| CentroidFold | [ FASTA input ] | [ sec struct ] | ..((((..(.(((.((...........))..))).).)))).. |
| CentroidHomfold‑LAST | [ FASTA input ] | [ sec struct ] | ..((((....(((.((((.....))..))..)))...)))).. |
| ContextFold | [ FASTA input ] | [ sec struct ] | ..((((....(((.((((.....))..))..)))...)))).. |
| Contrafold | [ FASTA input ] | [ sec struct ] | ..((((..(.(((.(.(((.......))).)))).).)))).. |
| Cylofold | [ FASTA input ] | [ sec struct ] | ..(((((........................)))))....... |
| DAFS(seed) | [ FASTA input ] | [ sec struct ] | ((((((....(((.((((.....))..))..)))...)))))) |
| DAFS(20) | [ FASTA input ] | [ sec struct ] | ((((((....(((.((((.....))..))..)))...)))))) |
| DotKnot | [ FASTA input ] | [ sec struct ] | ..((((....[[[...[[[.))))..]]]..]]]......... |
| Fold | [ FASTA input ] | [ sec struct ] | ..((((....(((.((((.....))..))..)))...)))).. |
| HotKnots | [ FASTA input ] | [ sec struct ] | ..((((....(((...(((.......)))..)))...)))).. |
| IPknot | [ FASTA input ] | [ sec struct ] | ..((((....(((.((((.....))..))..)))...)))).. |
| MCFold (ext) | [ FASTA input ] | [ sec struct ] | .(((((.((((((.(((.((((..)))))))))))))))))). |
| MXScarna(seed) | [ FASTA input ] | [ sec struct ] | .(((((.(..(((.((((.....))..))..))).).))))). |
| MXScarna(20) | [ FASTA input ] | [ sec struct ] | .(((((.(..(((.((((.....))..))..))).).))))). |
| Mastr(seed) | [ FASTA input ] | [ sec struct ] | ((((((.(..(((...((.....))......))).).)))))) |
| Mastr(20) | [ FASTA input ] | [ sec struct ] | ((((((.(..(((...((.....))......))).).)))))) |
| MaxExpect | [ FASTA input ] | [ sec struct ] | ..((((....(((.((((.....))..))..)))...)))).. |
| McQFold | [ FASTA input ] | [ sec struct ] | ..((((..............((((........)))).)))).. |
| Multilign(20) | [ FASTA input ] | [ sec struct ] | ..((((....(((...(((.......)))..)))...)))).. |
| Murlet(seed) | [ FASTA input ] | [ sec struct ] | .(((((....(((.((((.....))..))..)))...))))). |
| Murlet(20) | [ FASTA input ] | [ sec struct ] | ((((((.(.(.((.((((.....))..)).)).).).)))))) |
| PETfold_2.0(seed) | [ FASTA input ] | [ sec struct ] | ((((((....(((.((((.....))..))..)))...)))))) |
| PETfold_2.0(20) | [ FASTA input ] | [ sec struct ] | ((((((....(((.((((.....))..))..)))...)))))) |
| PETfold_pre2.0(seed) | [ FASTA input ] | [ sec struct ] | ((((((....(((.((((.....))..))..)))...)))))) |
| PETfold_pre2.0(20) | [ FASTA input ] | [ sec struct ] | ((((((....(((.((((.....))..))..)))...)))))) |
| PPfold(20) | [ FASTA input ] | [ sec struct ] | ((((((.....((.((((.....))..)).)).....)))))) |
| Pknots | [ FASTA input ] | [ sec struct ] | ..(((((..[[((....))....(......))))))....]]. |
| PknotsRG | [ FASTA input ] | [ sec struct ] | ..((((....(((.((((.....))..))..)))...)))).. |
| ProbKnot | [ FASTA input ] | [ sec struct ] | ..((((....(((..................)))...)))).. |
| RDfolder | [ FASTA input ] | [ sec struct ] | ...............................(((.....))). |
| RNASLOpt | [ FASTA input ] | [ sec struct ] | ..(((((........................)))))....... |
| RNASampler(seed) | [ FASTA input ] | [ sec struct ] | ..........(((..................)))......... |
| RNASampler(20) | [ FASTA input ] | [ sec struct ] | ..((((....(((..................)))...)))).. |
| RNAalifold(seed) | [ FASTA input ] | [ sec struct ] | .(((((....(((.((((.....))..))..)))...))))). |
| RNAalifold(20) | [ FASTA input ] | [ sec struct ] | ((((((.(.(.((.((((.....))..)).)).).).)))))) |
| RNAfold | [ FASTA input ] | [ sec struct ] | ..((((....(((.((((.....))..))..)))...)))).. |
| RNAshapes | [ FASTA input ] | [ sec struct ] | ..((((....(((.((((.....))..))..)))...)))).. |
| RNAsubopt | [ FASTA input ] | [ sec struct ] | ..((((....(((...(((.......)))..)))...)))).. |
| RNAwolf (ext) | [ FASTA input ] | [ sec struct ] | ..(((.(...(((.(((........).)).)))....)))).. |
| RSpredict(seed) | [ FASTA input ] | [ sec struct ] | ..((((....(((...((.....))......)))...)))).. |
| RSpredict(20) | [ FASTA input ] | [ sec struct ] | ..((((....(((...((.....))......)))...)))).. |
| Sfold | [ FASTA input ] | [ sec struct ] | ..((((....(((..................)))...)))).. |
| TurboFold(20) | [ FASTA input ] | [ sec struct ] | ..((((....(((.((((.....))..))..)))...)))).. |
| UNAFold | [ FASTA input ] | [ sec struct ] | ..((((....(((.((((.....))..))..)))...)))).. |
| Vsfold4 | [ FASTA input ] | [ sec struct ] | ..(((((........................)))))....... |
| Vsfold5 | [ FASTA input ] | [ sec struct ] | ..(((((........................)))))....... |