RNA Secondary Structure Atlas - RNASTRAND - RFA_00762

RNA: RFA_00762
Rfam family: s2m

			CAGUGCCGAGGCCACUCGGAGUACGAUCGAGGGUACAGCACUA
Reference structure (ext)		[ sec struct ]	.(((((....(((.((((.....))..))..)))...))))).
Afold	[ FASTA input ]	[ sec struct ]	((((((....(((.(((((.......))))))))...))))))
Alterna	[ FASTA input ]	[ sec struct ]	.(((((.(..(((.(((((.......)))))))).).))))).
CMfinder(seed)	[ FASTA input ]	[ sec struct ]	.(((((....(((...((.....))......)))...))))).
CMfinder(20)	[ FASTA input ]	[ sec struct ]	.(((((....(((...((.....))......)))...))))).
CRWrnafold	[ FASTA input ]	[ sec struct ]	.(((((....(((.(((((.......))))))))...))))).
Carnac(seed)	[ FASTA input ]	[ sec struct ]	.(((((...............................))))).
Carnac(20)	[ FASTA input ]	[ sec struct ]	.(((((...............................))))).
CentroidAlifold(seed)	[ FASTA input ]	[ sec struct ]	((((((.(..(((.((((.....))..))..))).).))))))
CentroidAlifold(20)	[ FASTA input ]	[ sec struct ]	((((((.(..(((.((((.....))..))..))).).))))))
CentroidFold	[ FASTA input ]	[ sec struct ]	.(((((.(..(((.(((((.......)))))))).).))))).
CentroidHomfold‑LAST	[ FASTA input ]	[ sec struct ]	.(((((....(((.(.((.....))...)..)))...))))).
ContextFold	[ FASTA input ]	[ sec struct ]	.(((((....(((.(.((.....))...)..)))...))))).
Contrafold	[ FASTA input ]	[ sec struct ]	.(((((.(..(((.(((((.......)))))))).).))))).
Cylofold	[ FASTA input ]	[ sec struct ]	.(((((((((....))))).((((........))))..)))).
DAFS(seed)	[ FASTA input ]	[ sec struct ]	((((((....(((.((((.....))..))..)))...))))))
DAFS(20)	[ FASTA input ]	[ sec struct ]	((((((....(((.((((.....))..))..)))...))))))
DotKnot	[ FASTA input ]	[ sec struct ]	.(((((....(((.(((((.......))))))))...))))).
Fold	[ FASTA input ]	[ sec struct ]	.(((((....(((.(((((.......))))))))...))))).
HotKnots	[ FASTA input ]	[ sec struct ]	.(((((....(((.(((((.......))))))))...))))).
IPknot	[ FASTA input ]	[ sec struct ]	.(((((....(((.(((((.......))))))))...))))).
MCFold (ext)	[ FASTA input ]	[ sec struct ]	.((((((((((..))))).((((((((..))))))))))))).
MXScarna(seed)	[ FASTA input ]	[ sec struct ]	.(((((.(..(((.((((.....))..))..))).).))))).
MXScarna(20)	[ FASTA input ]	[ sec struct ]	.(((((.(..(((.((((.....))..))..))).).))))).
Mastr(seed)	[ FASTA input ]	[ sec struct ]	((((((.(..(((...((.....))......))).).))))))
Mastr(20)	[ FASTA input ]	[ sec struct ]	((((((.(..(((.(.((.....))...)..))).).))))))
MaxExpect	[ FASTA input ]	[ sec struct ]	.(((((....(((.((((.........)))))))...))))).
McQFold	[ FASTA input ]	[ sec struct ]	.(((((((((....))))).((((........))))..)))).
Multilign(20)	[ FASTA input ]	[ sec struct ]	.(((((....(((..(((.........))).)))...))))).
Murlet(seed)	[ FASTA input ]	[ sec struct ]	.(((((....(((.((((.....))..))..)))...))))).
Murlet(20)	[ FASTA input ]	[ sec struct ]	.(((((....(((.((((.....))..))..)))...))))).
PETfold_2.0(seed)	[ FASTA input ]	[ sec struct ]	((((((....(((.((((.....))..))..)))...))))))
PETfold_2.0(20)	[ FASTA input ]	[ sec struct ]	((((((....(((.((((.....))..))..)))...))))))
PETfold_pre2.0(seed)	[ FASTA input ]	[ sec struct ]	((((((....(((.((((.....))..))..)))...))))))
PETfold_pre2.0(20)	[ FASTA input ]	[ sec struct ]	((((((....(((.((((.....))..))..)))...))))))
PPfold(20)	[ FASTA input ]	[ sec struct ]	.(((((.....((.((((.....))..)).)).....))))).
Pknots	[ FASTA input ]	[ sec struct ]	.(((((((((....))))..((((........)))).))))).
PknotsRG	[ FASTA input ]	[ sec struct ]	.(((((....(((.(((((.......))))))))...))))).
ProbKnot	[ FASTA input ]	[ sec struct ]	.(((((....(((.(((((.......))))))))...))))).
RDfolder	[ FASTA input ]	[ sec struct ]	.....(((((....))))).((((........)))).......
RNASLOpt	[ FASTA input ]	[ sec struct ]	.....(((((....))))).((((........)))).......
RNASampler(seed)	[ FASTA input ]	[ sec struct ]	.(((((...............................))))).
RNASampler(20)	[ FASTA input ]	[ sec struct ]	..........(((..................))).........
RNAalifold(seed)	[ FASTA input ]	[ sec struct ]	.(((((....(((.((((.....))..))..)))...))))).
RNAalifold(20)	[ FASTA input ]	[ sec struct ]	.(((((....(((.((((.....))..))..)))...))))).
RNAfold	[ FASTA input ]	[ sec struct ]	.(((((....(((.(((((.......))))))))...))))).
RNAshapes	[ FASTA input ]	[ sec struct ]	.(((((....(((.(((((.......))))))))...))))).
RNAsubopt	[ FASTA input ]	[ sec struct ]	.(((((((((....))))..((((........)))).))))).
RNAwolf (ext)	[ FASTA input ]	[ sec struct ]	.((((.(((((((.(((((......).))))))))))))))).
RSpredict(seed)	[ FASTA input ]	[ sec struct ]	.(((((....(((...((.....))......)))...))))).
RSpredict(20)	[ FASTA input ]	[ sec struct ]	.(((((....(((...((.....))......)))...))))).
Sfold	[ FASTA input ]	[ sec struct ]	.(((((....(((.(((((.......))))))))...))))).
TurboFold(20)	[ FASTA input ]	[ sec struct ]	.(((((((((....))))..((((........)))).))))).
UNAFold	[ FASTA input ]	[ sec struct ]	.(((((....(((.(((((.......))))))))...))))).
Vsfold4	[ FASTA input ]	[ sec struct ]	.(((((((((....))))..((((........)))).))))).
Vsfold5	[ FASTA input ]	[ sec struct ]	.(((((((((....))))..((((........)))).))))).

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