 | ||||||||||||||
| ||||||||||||||
 | ||||||||||||||
RNA Secondary Structure Atlas - RNASTRAND - RFA_00808
RNA: RFA_00808
Rfam family:
RydC
| CUUCCGAUGUAGGCCCGUAUUCUUCGCCUGUACCACGGGUCGGUUUUAGUACAGGCGUUUUCUU | |||
| Reference structure (ext) | [ sec struct ] | ...........(((((((......[[[[[[[[[.))))))).......]]]]]]]]]....... | |
| Afold | [ FASTA input ] | [ sec struct ] | (...........(((.(((((..(((((((.....)))).)))....))))).))).......) |
| Alterna | [ FASTA input ] | [ sec struct ] | .....((((....((.(((((((..((((((...)))))).))....))))).))))))..... |
| CMfinder(seed) | [ FASTA input ] | [ sec struct ] | ......((........))......(((((((((...............)))))))))....... |
| CRWrnafold | [ FASTA input ] | [ sec struct ] | .....((.....(((.(((((..((((((((...))))).)))....))))).)))....)).. |
| Carnac(seed) | [ FASTA input ] | [ sec struct ] | ................................................................ |
| CentroidAlifold(seed) | [ FASTA input ] | [ sec struct ] | ........................((((((((((((.........))))))))))))....... |
| CentroidFold | [ FASTA input ] | [ sec struct ] | ........................(((((((((...............)))))))))....... |
| CentroidHomfold‑LAST | [ FASTA input ] | [ sec struct ] | ........................(((((((((...............)))))))))....... |
| ContextFold | [ FASTA input ] | [ sec struct ] | .((........(((((((................)))))))............))......... |
| Contrafold | [ FASTA input ] | [ sec struct ] | ........................(((((((((....((....))...)))))))))....... |
| DAFS(seed) | [ FASTA input ] | [ sec struct ] | ........................(((((((((...............)))))))))....... |
| DotKnot | [ FASTA input ] | [ sec struct ] | ...........(((((((......[[[[[[[[[.))))))).......]]]]]]]]]....... |
| Fold | [ FASTA input ] | [ sec struct ] | .....((.....(((.(((((..((((((((...))))).)))....))))).)))....)).. |
| HotKnots | [ FASTA input ] | [ sec struct ] | ...........(((((((......[[[[[[[[[.))))))).......]]]]]]]]]....... |
| IPknot | [ FASTA input ] | [ sec struct ] | ........................(((((((((...............)))))))))....... |
| MCFold (ext) | [ FASTA input ] | [ sec struct ] | ......(((((((((((((...))))(((((((((.((((..)))))))))))))))))))))) |
| MXScarna(seed) | [ FASTA input ] | [ sec struct ] | .....((...(.(((.(((((..((((((((...))))).)))....))))).))).)..)).. |
| Mastr(seed) | [ FASTA input ] | [ sec struct ] | .....((.....(((.(((((..(((((((.....)))).)))....))))).)))....)).. |
| MaxExpect | [ FASTA input ] | [ sec struct ] | ...((......))...........(((((((((....((.....))..)))))))))....... |
| McQFold | [ FASTA input ] | [ sec struct ] | ...........(((((((......[[[[[[[[[.))))))).......]]]]]]]]]....... |
| Multilign(seed) | [ FASTA input ] | [ sec struct ] | ...((......))...........(((((((((...(((.....))).)))))))))....... |
| Murlet(seed) | [ FASTA input ] | [ sec struct ] | ........................(((((((((...............)))))))))....... |
| NanoFolder | [ FASTA input ] | [ sec struct ] | ...(((((.[[[[[[[[[)))...{{{{{{{{{.]]]]]]]))...]]}}}}}}}}}....... |
| PETfold_2.0(seed) | [ FASTA input ] | [ sec struct ] | ........................((((((((((.............))))))))))....... |
| PETfold_pre2.0(seed) | [ FASTA input ] | [ sec struct ] | ........................((((((((((.............))))))))))....... |
| PPfold(seed) | [ FASTA input ] | [ sec struct ] | ........................(((((((((...............)))))))))....... |
| Pknots | [ FASTA input ] | [ sec struct ] | ...........(((((((......[[[[[[[[[.))))))).......]]]]]]]]]....... |
| PknotsRG | [ FASTA input ] | [ sec struct ] | ...........(((((((......[[[[[[[[[.))))))).......]]]]]]]]]....... |
| ProbKnot | [ FASTA input ] | [ sec struct ] | ........................(((((((((...(((.....))).)))))))))....... |
| RDfolder | [ FASTA input ] | [ sec struct ] | (((.......)))...........(((((((((...............)))))))))....... |
| RNASLOpt | [ FASTA input ] | [ sec struct ] | ........................(((((((((...............)))))))))....... |
| RNASampler(seed) | [ FASTA input ] | [ sec struct ] | ......(((......)))......(((((((((...(((.....))).)))))))))....... |
| RNAalifold(seed) | [ FASTA input ] | [ sec struct ] | ........................(((((((((...............)))))))))....... |
| RNAfold | [ FASTA input ] | [ sec struct ] | .....((...(.(((.(((((..(((((((.....)))).)))....))))).))).)..)).. |
| RNAshapes | [ FASTA input ] | [ sec struct ] | ............(((.(((((..(((((((.....)))).)))....))))).)))........ |
| RNAsubopt | [ FASTA input ] | [ sec struct ] | .....((...(.(((.(((((..(((((((.....)))).)))....))))).))).)..)).. |
| RNAwolf (ext) | [ FASTA input ] | [ sec struct ] | .....((.............))..(((((((((...............)))))))))....... |
| RSpredict(seed) | [ FASTA input ] | [ sec struct ] | ..........(((...(........((((((((...............))))))))..).))). |
| Sfold | [ FASTA input ] | [ sec struct ] | .....((...(.(((.(((((..((((((((...))))).)))....))))).))).)..)).. |
| TurboFold(seed) | [ FASTA input ] | [ sec struct ] | ........................(((((((((...............)))))))))....... |
| UNAFold | [ FASTA input ] | [ sec struct ] | ............(((.(((((..(((((((.....)))).)))....))))).)))........ |
| Vsfold4 | [ FASTA input ] | [ sec struct ] | .....((((........))))...(((((((((...............)))))))))....... |
| Vsfold5 | [ FASTA input ] | [ sec struct ] | ...........(((((((......[[[[[[[[[.))))))).......]]]]]]]]]....... |