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RNA Secondary Structure Atlas - RNASTRAND - SPR_00363
RNA: SPR_00363
Rfam family:
-
| GGACGUUAAAUAGAUAAGCUAUGCCUAGUUACGGGCUGGGAAGAGAGUCGUCUUCCA | |||
| Reference structure (ext) | [ sec struct ] | (((((.(..((((.....)))).(((((.......)))))......).))))).... | |
| Alterna | [ FASTA input ] | [ sec struct ] | (((((............(((.(.(((((((...))))))).)...)))))))).... |
| CRWrnafold | [ FASTA input ] | [ sec struct ] | ......................((((......))))..((((((......)))))). |
| CentroidFold | [ FASTA input ] | [ sec struct ] | ......................((((......))))..((((((......)))))). |
| CentroidHomfold‑LAST | [ FASTA input ] | [ sec struct ] | ......................................((((((......)))))). |
| ContextFold | [ FASTA input ] | [ sec struct ] | (((((.................(((........)))............))))).... |
| Contrafold | [ FASTA input ] | [ sec struct ] | ......................((((......))))..((((((......)))))). |
| Cylofold | [ FASTA input ] | [ sec struct ] | ................((((..[[[[))))..]]]]..((((((......)))))). |
| DotKnot | [ FASTA input ] | [ sec struct ] | .(((.....((((.....))))[[[[.)))..]]]]..((((((......)))))). |
| Fold | [ FASTA input ] | [ sec struct ] | ..........(((.....))).((((......))))..((((((......)))))). |
| HotKnots | [ FASTA input ] | [ sec struct ] | (((........((((...((...((((((.....))))))...))....))))))). |
| IPknot | [ FASTA input ] | [ sec struct ] | ..........(((.....))).((([[......)))]]((((((......)))))). |
| MCFold (ext) | [ FASTA input ] | [ sec struct ] | ((((((((((((((((...)))..)))))))))))))((((((((...).))))))) |
| MaxExpect | [ FASTA input ] | [ sec struct ] | ..........(((.....))).((((......))))..((((((......)))))). |
| McQFold | [ FASTA input ] | [ sec struct ] | ......................((((......))))..((((((......)))))). |
| Pknots | [ FASTA input ] | [ sec struct ] | .........((((.....))))((((......))))..((((((......)))))). |
| PknotsRG | [ FASTA input ] | [ sec struct ] | ................(((((.[[[)))))...]]]..((((((......)))))). |
| ProbKnot | [ FASTA input ] | [ sec struct ] | .....(((.[[[[.).))]]]]((((......))))..((((((......)))))). |
| RDfolder | [ FASTA input ] | [ sec struct ] | ......................(((........)))..((((((......)))))). |
| RNASLOpt | [ FASTA input ] | [ sec struct ] | .........((((.....))))((((......))))..((((((......)))))). |
| RNAfold | [ FASTA input ] | [ sec struct ] | (((........(((((..((...((((((.....))))))...))..).))))))). |
| RNAshapes | [ FASTA input ] | [ sec struct ] | (((........((((...((...((((((.....))))))...))....))))))). |
| RNAsubopt | [ FASTA input ] | [ sec struct ] | .........((((.....))))((((......))))..((((((......)))))). |
| RNAwolf (ext) | [ FASTA input ] | [ sec struct ] | (((((.((((((((........).)))))))))).)).(((((........))))). |
| Sfold | [ FASTA input ] | [ sec struct ] | .......................((((((.....))))))................. |
| UNAFold | [ FASTA input ] | [ sec struct ] | (((........((((...((...((((((.....))))))...))....))))))). |
| Vsfold4 | [ FASTA input ] | [ sec struct ] | ..........(((.....))).((((......))))..((((((......)))))). |
| Vsfold5 | [ FASTA input ] | [ sec struct ] | .........((((.....))))((((......))))..((((((......)))))). |