CompaRNA - on-line benchmarks of RNA structure prediction methods
Home

Methods
Datasets
Rankings
RNA 2D Atlas

Help
FAQ

Contact us
RSS feeds
Twitter

Fold 2D structure prediction for record CRW_00804



REFERENCE VS PREDICTED RNA SECONDARY STRUCTURE

Figure 1. Graph showing comparison of reference (upper part) and predicted by Fold (lower part) secondary structures of RNA chain CRW_00804.

Download Fold input in FASTA format

Download reference file

Download predicted .bpseq file



Table 1. Summary of base pair counts (true positives, true negatives, etc). Individual counts can be directly read on the graph above or can be extracted by comparing two bpseq files above.

Base Pair Counts
MCC 0.28
SENS 0.28
PPV 0.27
TP 114
TN 1420031
FP 431
FP CONTRA 54
FP INCONS 256
FP COMP 121
FN 289

^top


RNA 2D structure plot generated with R-Chie.