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Carnac(20) 2D structure prediction for record CRW_00152



REFERENCE VS PREDICTED RNA SECONDARY STRUCTURE

Figure 1. Graph showing comparison of reference (upper part) and predicted by Carnac(20) (lower part) secondary structures of RNA chain CRW_00152.

Download Carnac(20) input in FASTA format

Download reference file

Download predicted .bpseq file



Table 1. Summary of base pair counts (true positives, true negatives, etc). Individual counts can be directly read on the graph above or can be extracted by comparing two bpseq files above.

Base Pair Counts
MCC 0.69
SENS 0.52
PPV 0.92
TP 244
TN 1180151
FP 26
FP CONTRA 4
FP INCONS 17
FP COMP 5
FN 227

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RNA 2D structure plot generated with R-Chie.