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Sfold 2D structure prediction for record CRW_00177



REFERENCE VS PREDICTED RNA SECONDARY STRUCTURE

Figure 1. Graph showing comparison of reference (upper part) and predicted by Sfold (lower part) secondary structures of RNA chain CRW_00177.

Download Sfold input in FASTA format

Download reference file

Download predicted .bpseq file



Table 1. Summary of base pair counts (true positives, true negatives, etc). Individual counts can be directly read on the graph above or can be extracted by comparing two bpseq files above.

Base Pair Counts
MCC 0.45
SENS 0.41
PPV 0.50
TP 195
TN 1178491
FP 206
FP CONTRA 27
FP INCONS 167
FP COMP 12
FN 278

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RNA 2D structure plot generated with R-Chie.