CompaRNA - on-line benchmarks of RNA structure prediction methods
Home

Methods
Datasets
Rankings
RNA 2D Atlas

Help
FAQ

Contact us
RSS feeds
Twitter

RDfolder 2D structure prediction for record 2WW9_D



REFERENCE VS PREDICTED RNA SECONDARY STRUCTURE

Figure 1. Graph showing comparison of reference (upper part) and predicted by RDfolder (lower part) secondary structures of RNA chain 2WW9_D.

Download RDfolder input in FASTA format

Download reference .bpseq file

Download predicted .bpseq file



Table 1. Summary of base pair counts (true positives, true negatives, etc). Individual counts can be directly read on the graph above or can be extracted by comparing two bpseq files above.

Base Pair Counts
MCC 0.31
SENS 0.10
PPV 1.00
TP 1
TN 740
FP 3
FP CONTRA 0
FP INCONS 0
FP COMP 3
FN 9

^top


RNA 2D structure plot generated with R-Chie.