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RSpredict(seed) 2D structure prediction for record 3IVN_B
REFERENCE VS PREDICTED RNA SECONDARY STRUCTURE
Figure 1. Graph showing comparison of reference (upper part) and predicted by RSpredict(seed) (lower part) secondary structures of RNA chain 3IVN_B.
Download RSpredict(seed) input in FASTA format
Table 1. Summary of base pair counts (true positives, true negatives, etc). Individual counts can be directly read on the graph above or can be extracted by comparing two bpseq files above.
| Base Pair Counts | |
|---|---|
| MCC | 0.69 |
| SENS | 0.52 |
| PPV | 0.94 |
| TP | 16 |
| TN | 2329 |
| FP | 1 |
| FP CONTRA | 0 |
| FP INCONS | 1 |
| FP COMP | 0 |
| FN | 15 |
RNA 2D structure plot generated with R-Chie.