Molecule image



Full name2′‐O‐Methyl-5-hydroxymethylcytidine
Short namehm5Cm
New Nomenclature
RNAMods abbreviation¡
Found in phylogeny
Found in RNA
SMILES (no stereochemical information)COC1C(O)[C@@H](CO)O[C@H]1N1C=C(CO)C(N)=NC1=O

LC-MS Information

Sum formulaC11H17N3O6
Monoisotopic mass287.1117
Average mass287.272
[M+H]+ not available
Product ions not available
Normalized LC elution time * not available
LC elution order/characteristics not available

* normalized to guanosine (G), measured with a RP C-18 column with acetonitrile/ammonium acetate as mobile phase.

3D Molecule representation

Download [.mol file for hm5Cm]


Title Authors Journal Details PubMed Id DOI
2'-O-Methyl-5-hydroxymethylcytidine: A Second Oxidative Derivative of 5-Methylcytidine in RNA. Huber SM, van Delft P, Tanpure A, Miska EA, Balasubramanian S... J Am Chem Soc [details] 28107630 -

Last modification of this entry: April 1, 2019

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