Molecule image



Full name3-(3-amino-3-carboxypropyl)pseudouridine
Short nameacp3Y
New Nomenclature309U
RNAMods abbreviationÞ
Found in phylogeny
Found in RNA
SMILES (no stereochemical information)NC(CCN1C(=O)NC=C(C2OC(CO)C(O)C2O)C1=O)C(O)=O

LC-MS Information

Sum formulaC13H19N3O8
Monoisotopic mass345.1172
Average mass345.3093
Product ions214
Normalized LC elution time * not available
LC elution order/characteristics not available

* normalized to guanosine (G), measured with a RP C-18 column with acetonitrile/ammonium acetate as mobile phase.

3D Molecule representation

Download [.mol file for acp3Y]


acp3Y is accumulated when the Nep1 enzyme is absent. The enzyme catalyzing the acp3Y formation in S. cerevisiae is still unknown.

Reactions producing 3-(3-amino-3-carboxypropyl)pseudouridine



Title Authors Journal Details PubMed Id DOI
The Bowen-Conradi syndrome protein Nep1 (Emg1) has a dual role in eukaryotic ribosome biogenesis, as an essential assembly factor and in the methylation of Psi1191 in yeast 18S rRNA. Meyer B, Wurm JP, Kotter P, Leisegang MS, Schilling V, Buchhaupt M, Held M, Bahr U, Karas M, Heckel A, Bohnsack MT, Wohnert J, Entian KD Nucleic Acids Res [details] 20972225 -

Last modification of this entry: Oct. 6, 2017

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