Molecule image

m5Cm

Summary

Full name5,2′-O-dimethylcytidine
Short namem5Cm
New Nomenclature05C
RNAMods abbreviationτ
Enzymes
Found in phylogeny
Found in RNA
SMILESC3(OC(CO)C(O)C(O(C))3)N1C=C(C)C(N)=NC1(=O)
SMILES (no stereochemical information)C3(OC(CO)C(O)C(O(C))3)N1C=C(C)C(N)=NC1(=O)

LC-MS Information

Sum formulaC11O5N3H17
Monoisotopic mass271.1168
Average mass271.2737
[M+H]+272.1246
Product ions126
Normalized LC elution time * not available
LC elution order/characteristics not available

* normalized to guanosine (G), measured with a RP C-18 column with acetonitrile/ammonium acetate as mobile phase.

3D Molecule representation

Download [.mol file for m5Cm]

Chemical groups contained

TypeSubtype
methyl groupmethyl at O2
methyl groupmethyl at aromatic C

Reactions producing 5,2′-O-dimethylcytidine

Name
Cm:m5Cm
m5C:m5Cm

Last modification of this entry: Oct. 6, 2017

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