Molecule image

ncm5Um

Summary

Full name5-carbamoylmethyl-2′-O-methyluridine
Short namencm5Um
New Nomenclature053U
RNAMods abbreviation~
Enzymes Trm7 (Saccharomyces cerevisiae)
Found in phylogeny
Found in RNA
SMILESC3(OC(CO)C(O)C(O(C))3)N1C=C(CC(=O)N)C(=O)NC1(=O)
SMILES (no stereochemical information)C3(OC(CO)C(O)C(O(C))3)N1C=C(CC(=O)N)C(=O)NC1(=O)

LC-MS Information

Sum formulaC12O7N3H17
Monoisotopic mass315.1066
Average mass315.2833
[M+H]+316.1144
Product ions170/153/125
Normalized LC elution time * not available
LC elution order/characteristics not available

* normalized to guanosine (G), measured with a RP C-18 column with acetonitrile/ammonium acetate as mobile phase.

3D Molecule representation

Download [.mol file for ncm5Um]

Chemical groups contained

TypeSubtype
methyl groupmethyl at O2
methyl groupmethyl at aromatic C
othercarbamoyl

Reactions producing 5-carbamoylmethyl-2′-O-methyluridine

Name
ncm5U:ncm5Um

Last modification of this entry: Oct. 6, 2017

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