Full name | 5-carboxymethyluridine |
Short name | cm5U |
New Nomenclature | 52U |
RNAMods abbreviation | ◊ |
Enzymes | |
Found in phylogeny | Eukaryota |
Found in RNA | |
PubChem ID | 3080720 |
SMILES | C3(OC(CO)C(O)C(O)3)N1C=C(CC(=O)O)C(=O)NC1(=O) |
SMILES (no stereochemical information) | C3(OC(CO)C(O)C(O)3)N1C=C(CC(=O)O)C(=O)NC1(=O) |
Sum formula | C11O8N2H14 |
Monoisotopic mass | 302.075 |
Average mass | 302.241 |
[M+H]+ | 303.0828 |
Product ions | 171 |
Normalized LC elution time * | not available |
LC elution order/characteristics | not available |
* normalized to guanosine (G), measured with a RP C-18 column with acetonitrile/ammonium acetate as mobile phase.
Title | Authors | Journal | Details | ||
---|---|---|---|---|---|
Quantitative analysis of ribonucleoside modifications in tRNA by HPLC-coupled mass spectrometry. | Su D, Chan CT, Gu C, Lim KS, Chionh YH, McBee ME, Russell BS, Babu IR, Begley TJ, Dedon PC... | Nat Protoc | [details] | 24625781 | - |
Download [.mol file for cm5U]
Type | Subtype |
---|---|
other | carboxymethyl |
Name |
---|
U:cm5U |
Name |
---|
cm5U:mcm5U |
cm5U:chm5U |
Last modification of this entry: Oct. 6, 2017