Molecule image

f5Cm

Summary

Full name5-formyl-2′-O-methylcytidine
Short namef5Cm
New Nomenclature071C
RNAMods abbreviation°
Enzymes
Found in phylogeny
Found in RNAtRNA
SMILESC3(OC(CO)C(O)C(O(C))3)N1C=C(C(=O))C(N)=NC1(=O)
SMILES (no stereochemical information)C3(OC(CO)C(O)C(O(C))3)N1C=C(C(=O))C(N)=NC1(=O)

LC-MS Information

Sum formulaC11O6N3H15
Monoisotopic mass285.0961
Average mass285.257
[M+H]+286.1039
Product ions140
Normalized LC elution time * not available
LC elution order/characteristics not available

* normalized to guanosine (G), measured with a RP C-18 column with acetonitrile/ammonium acetate as mobile phase.

3D Molecule representation

Download [.mol file for f5Cm]

Chemical groups contained

TypeSubtype
methyl groupmethyl at O2
otherformyl

Reactions producing 5-formyl-2′-O-methylcytidine

Name
f5C:f5Cm
Cm:f5Cm

Last modification of this entry: Oct. 6, 2017

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