Molecule image

ct6A

Summary

Full namecyclic N6-threonylcarbamoyladenosine
Short namect6A
New Nomenclature69A
RNAMods abbreviatione
Enzymes TcdA (Escherichia coli)
Found in phylogenyEubacteria
Found in RNAtRNA
SMILESC(O)(C4N/C(=N\c1c3c(ncn1)n([C@H]2C([C@H]([C@H](O2)CO)O)O)cn3)OC4=O)C
SMILES (no stereochemical information)C(O)(C4N/C(=N\c1c3c(ncn1)n([C@H]2C([C@H]([C@H](O2)CO)O)O)cn3)OC4=O)C

LC-MS Information

Sum formulaC15O7N6H18
Monoisotopic mass394.1237
Average mass394.3442
[M+H]+395.1315
Product ions263
Normalized LC elution time *1,28 (Kellner 2014); 1,47 (Kellner 2014); 1,83 (Kellner 2014)
LC elution order/characteristicsbetween G and A (Kellner 2014); between A and m6A (Kellner 2014);

* normalized to guanosine (G), measured with a RP C-18 column with acetonitrile/ammonium acetate as mobile phase.


LC-MS Publications

Title Authors Journal Details PubMed Id DOI
Profiling of RNA modifications by multiplexed stable isotope labelling. Kellner S, Neumann J, Rosenkranz D, Lebedeva S, Ketting RF, Zischler H, Schneider D, Helm M. Chem Commun (Camb). [details] 24567952 -

3D Molecule representation

Download [.mol file for ct6A]

Reactions producing cyclic N6-threonylcarbamoyladenosine

Name
t6A:ct6A

Reactions starting from cyclic N6-threonylcarbamoyladenosine

Name
ct6A:t6A

Last modification of this entry: Oct. 6, 2017

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