mqaprna.py

ver: 5ab0ce1-dirty

start  2017-07-11 05:43:02
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Seq ss fn                   /home/mqapRNA/mqapRNAweb/media/jobs/325aca7f-f6d0-42b7-a789-d65305be7a16/ss.txt
Output csv                  /home/mqapRNA/mqapRNAweb/media/jobs/325aca7f-f6d0-42b7-a789-d65305be7a16/325aca7_raw.csv
Input files                 #5 ['input/17_Bujnicki_7_rpr.pdb', 'input/17_Das_1_rpr.pdb', 'input/17_Das_4_rpr.pdb']
RNAkb                       5pt
Model path                  /home/magnus/Dropbox/WORK_/mqaprna-papier/SVMlin.rda
Multiprocessing             on
Verbose                     off
Ignore pdb fn               off
Methods                     ClashScore,AnalyzeGeometry,FARNA,SimRNA_0,RNAscore,eSCORE,RNAkb,SSAgreement,FARNA_hires,RASP,RNAkb_all
rmsd                        biopython_all
Native pdb                  off
RASP                        all
in: /home/mqapRNA/mqapRNAweb/media/jobs/325aca7f-f6d0-42b7-a789-d65305be7a16/325aca7_raw.csv
model_key: grid-8a6dfea4-1f6e-4354-9396-f727a5bd937a_model_14
Checking whether there is an H2O instance running at http://localhost:54321. connected.
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H2O cluster uptime:         19 days 22 hours 15 mins
H2O cluster version:        3.10.4.5
H2O cluster version age:    2 months and 21 days
H2O cluster name:           magnus
H2O cluster total nodes:    1
H2O cluster free memory:    1.399 Gb
H2O cluster total cores:    8
H2O cluster allowed cores:  8
H2O cluster status:         locked, healthy
H2O connection url:         http://localhost:54321
H2O connection proxy:
H2O internal security:      False
Python version:             2.7.6 final
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H2O session _sid_917b closed.